Gymnodinialimonas sp. 57CJ19: AADW23_02980
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Entry
AADW23_02980 CDS
T10345
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gyj Gymnodinialimonas sp. 57CJ19
Brite
KEGG Orthology (KO) [BR:
gyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gyj03032
]
AADW23_02980 (gyrB)
03400 DNA repair and recombination proteins [BR:
gyj03400
]
AADW23_02980 (gyrB)
Enzymes [BR:
gyj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AADW23_02980 (gyrB)
DNA replication proteins [BR:
gyj03032
]
Prokaryotic type
DNA Topoisomerases
AADW23_02980 (gyrB)
DNA repair and recombination proteins [BR:
gyj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AADW23_02980 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
DUF1690
Motif
Other DBs
NCBI-ProteinID:
WZN79259
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Position
596346..598763
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AA seq
805 aa
AA seq
DB search
MSDTPANGEDYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADAVTVTIHADSSVSVHDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDWLELRIWRDGKEHIARFERGDTAKHLEVVGDAGGKTGTEVRFMAST
DTFSNLDYVFTTLENRLRELAFLNSGVRIILRDERPAEALESELFYEGGVREFVRYLDRS
KTTAMEEPIFITGEKDDIGVEVAMWWNDSYHENVLPFTNNIPQRDGGTHLAGFRGALTRT
INLYAQSSGIAKREKVNFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVEGL
VNEKLQEWFEEHPNEAKQIVGKIIEAALAREAARKARELTRRKTAMDIASLPGKLADCQE
KDPSKSEIFLVEGDSAGGSAKQGRSRHNQAILPLKGKILNVERARFDRMLGSQEIGTLIT
ALGTGIGRDEFNIDKLRYHKVVIMTDADVDGAHIRTLLLTFFFRQMPELIEGGYLYIAQP
PLYKVSRGKSEVYLKDEPAFEDYLVAQGIEGATLRLPSGEEIAGQDLARVVTGARNFKRI
LDAFPTHYPRHIVEQAALAGAFDAGKADADLQGVADTVAKRLDLVAVEYERGWNGRITQD
HGIRLSRVLRGVEEIRTLDGAVLRSGEARKLSEVSQDSRTIYQDPATLSRKDREQLIHGP
TELLNAILEEGARGQQMQRYKGLGEMNPDQLWETTLDPDARTLLQVKVSDLADADDIFTK
LMGDVVEPRREFIQNNALSVENLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacacccgcgaacggcgaagactatggcgccgattctattaaggttctcaaa
ggcttggaggctgttcgcaagcgccccggcatgtatatcggcgataccgacgatggctcg
ggcctgcatcacatggtctatgaggtcgtggacaacggcatcgacgaagcgctggcgggc
catgcggacgccgtaaccgtcacaatccacgccgacagcagcgtttccgtgcacgacaac
gggcgcggcattccggtgggcatccacgaggaagaaggcgtgtccgcggctgaggtcatc
atgacccaactgcacgcgggcggtaagttcgacagcaactcctacaaggtctcgggcggt
ctgcacggcgtgggcgtatcggttgtgaacgcgctgtccgattggctggaactgcgtatc
tggcgcgatggcaaagaacatatcgcccggtttgagcgcggcgataccgccaagcatctg
gaggtagtcggcgacgccggtggcaagaccggcaccgaagtgcgcttcatggcctccact
gacaccttctccaatcttgattacgtcttcaccacgctggagaaccgtttgcgggaactg
gcgttcctgaactcgggcgtgcgcatcatcctgcgtgatgaacgccctgccgaggcactg
gaaagcgaactgttttatgaaggcggcgtgcgcgaattcgtccgctacctcgaccgctcc
aaaaccacggccatggaagagccgatcttcatcaccggtgagaaggacgacatcggcgtt
gaagtcgccatgtggtggaacgacagctaccacgagaacgtgctgccgtttaccaacaac
atccctcaacgcgacggcggcacgcacctggccggcttccggggcgcgttgacgcggacc
atcaacctctatgcccagtccagcggcatcgccaagcgcgagaaggtgaactttaccggc
gatgatgcccgcgaaggtctgacctgcgtgttgtcggtgaaagtgccggacccgaagttc
agctctcagacaaaggacaagctggtctcgtccgaagtgcgccccgccgtcgaaggcttg
gtaaacgagaaattgcaggaatggttcgaggagcacccgaacgaggccaagcagatcgtc
ggcaagatcatcgaggccgctctggcccgcgaggccgcccgcaaggcgcgtgaactgacc
cggcgcaagacggcgatggatatcgcttcactgcccggaaagctggccgattgccaagag
aaagacccctccaagtctgaaatcttcctggtggagggtgactccgcaggcggttccgcc
aaacagggacgctcgcgccacaatcaggcgatcctgcctctgaagggtaaaatccttaac
gtcgaacgggcccgctttgaccggatgttgggcagccaggaaatcggcacgctgattacg
gcactgggcaccggcattggccgcgatgagttcaacatcgacaaactgcgctaccacaag
gtcgtcatcatgaccgacgccgacgtggatggcgcccacatccgcacacttctgctgacc
ttcttcttccgccagatgccggagctgatcgaaggcggctatctctatatcgcgcaaccg
ccgctctataaggtcagccgtggcaagtccgaagtctacctgaaggacgaacccgccttc
gaagattatctggttgcccaaggcatcgaaggcgcaaccctgcgcctgccctcgggcgaa
gaaatcgccgggcaagaccttgcccgcgtcgtcaccggggcgcgtaacttcaaacgtatc
ctcgatgccttccccactcactacccgcgccacatcgtggaacaagccgcacttgcaggc
gcatttgatgccggcaaagcggacgccgacctgcaaggcgtggccgacaccgtggccaag
cggctggatctggtggcggtagaatatgaacgcggctggaacggacgcatcacccaggat
cacggcatccgcctgtcccgcgtcttgcgcggggtcgaggaaatccgcaccctcgatggg
gccgtcttgcgctcgggcgaggcccgcaaattgtccgaggtctcccaagacagccgcacg
atctaccaggatccggcgacgctttcccgcaaggatcgcgaacagctgatccacggcccg
accgagcttctgaacgcgatccttgaagaaggggctcggggccagcaaatgcagcgctac
aaaggcttgggcgaaatgaaccccgaccagctctgggaaaccaccctggacccggacgcg
cgcacgctcttgcaggtcaaagtctccgatctggccgacgccgacgatatcttcaccaaa
ctcatgggcgatgtggtcgagccgcgtcgggaattcatccagaacaacgccctcagcgtc
gaaaacctggacttctaa
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