Gymnodinialimonas sp. 57CJ19: AADW23_04705
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Entry
AADW23_04705 CDS
T10345
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
gyj Gymnodinialimonas sp. 57CJ19
Pathway
gyj03030
DNA replication
gyj03430
Mismatch repair
gyj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gyj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AADW23_04705 (holA)
03430 Mismatch repair
AADW23_04705 (holA)
03440 Homologous recombination
AADW23_04705 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gyj03032
]
AADW23_04705 (holA)
03400 DNA repair and recombination proteins [BR:
gyj03400
]
AADW23_04705 (holA)
Enzymes [BR:
gyj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AADW23_04705 (holA)
DNA replication proteins [BR:
gyj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AADW23_04705 (holA)
DNA repair and recombination proteins [BR:
gyj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AADW23_04705 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
WZN79593
LinkDB
All DBs
Position
complement(962932..963963)
Genome browser
AA seq
343 aa
AA seq
DB search
MKLSTRDANTYFKRPDTSAAGCLIFGDDAMRVALKRQDLMAALLGENAEEEMRLTRMTGA
DLRSDSAGLLDAVKAVGFFPGPRAVLVEGATDGLAKVFTTAFEEWQQGDAQIIATAGRLT
AKSALRKVFEGNKLAYAAAIYDDPPGRAEIEDMLKAAEITDADREAMTDLEALARSIGPG
DFRQMIEKLGLYKRGDATPVVPADIEAVAPLTQEAELDDILHATAEAETGAIGPILVRLK
QQGTTPVSLCIAALRHFRALHMAAAHPNGPAAGLQAMRPPVFGPRRDRMARQAGRWGRDA
LEAALSMLIETDLTLRSASTAPQMAVMERTLIRLAMLPGRGRR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtccacccgtgacgcaaatacctacttcaaacggcccgatacctcggcggcg
gggtgtttgatctttggtgatgacgccatgcgggtcgccttgaaacggcaggatctaatg
gccgcccttctgggagagaacgcggaggaggaaatgcgcctgacgcggatgaccggggct
gacctgcgctcggacagtgcggggctgctggatgccgtaaaggctgtgggcttctttccc
ggcccccgtgccgttctggtcgagggcgcgacggatggcttggccaaagtctttaccacc
gcgtttgaggaatggcagcaaggtgacgcgcaaatcatcgccaccgccgggcggctgacc
gcaaaatctgccctgcgcaaagtattcgagggcaacaaactcgcctacgccgctgcgatc
tacgatgatccgccgggacgcgccgagattgaagatatgctcaaggccgcagaaatcacc
gacgcggaccgagaggcgatgacagacctggaggcgttggcgagatccatcgggcccggc
gatttccgccagatgatcgaaaagctggggctgtataaacgtggcgatgcgacgcccgtg
gtgcccgccgatatcgaggccgtggcccccctgacccaggaggcagagctggacgatatc
ctccacgcgactgccgaggcagagaccggcgcgatcggccccattctggtccgcctgaaa
cagcaaggcacaacgccggtgtccctgtgcatcgcggccctacgccacttccgggcgttg
cacatggccgccgcccatcccaacggccccgctgcgggcctgcaagcgatgcggccccca
gtcttcggcccgcgccgcgatcggatggcacgacaagcgggccgctggggccgcgacgcg
ttggaagcggccctatcgatgttgattgaaacggatctgaccctgcgctccgcaagcacc
gcgccgcagatggcggtgatggagcgcacgttgatccggctggcgatgctgccagggcgc
ggcaggcgatag
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