Gymnodinialimonas sp. 57CJ19: AADW23_04905
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Entry
AADW23_04905 CDS
T10345
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gyj Gymnodinialimonas sp. 57CJ19
Pathway
gyj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gyj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AADW23_04905 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gyj03019
]
AADW23_04905 (recQ)
03400 DNA repair and recombination proteins [BR:
gyj03400
]
AADW23_04905 (recQ)
Enzymes [BR:
gyj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AADW23_04905 (recQ)
Messenger RNA biogenesis [BR:
gyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AADW23_04905 (recQ)
DNA repair and recombination proteins [BR:
gyj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AADW23_04905 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HHH_5
Rhodanese
ResIII
Motif
Other DBs
NCBI-ProteinID:
WZN79631
LinkDB
All DBs
Position
1001233..1003290
Genome browser
AA seq
685 aa
AA seq
DB search
MLVEHPDTSALLKATFGFDDFRPGQAEIVEAVASGKDVLAIMPTGGGKSLCFQLPALMRD
GVTVVISPLIALMRDQVRGLREAGVEAGALTSGNTPEETDAVWAGLEAGTLKLLYLAPER
LASSGTERMLSRAGVSMIAVDEAHCVSQWGHDFRPDYLRLGALRRALNVPLAAFTATADA
ETRAEICERLFDAEPDVFLHGFDRPNLTLAFEVKNQPRQQILSFAAARKGQSGIVYCGTR
AKTETLARALRDEGHSACHYHGGMEAEDRRIVETRFNQEDGLIVCATVAFGMGVDKPDIR
WVAHADLPKSIEGYYQEIGRAGRDGAPADTLTLYGPDDIRFRRQQVDEGLAPPERKTADH
ARLNALLGLAEAQGCRRKVLLSYFGDASEDCGNCDLCAKPPELFDASVAVQKALSVMLRT
GEYFGAGHLIDVLLGAQNERIKQRGHDRLSTYGIGTEFDKRGWQAVFRQMMGRDLVRPDP
ERHGAFRMTQAARPILRGEESITLRKDTIAKAPRRPAVKMLVSEEDAPLMSALKAKRRAL
AEEARVPAYVIFTDKTLIEMAEKRPATLDEMARISGVGATKLDRYGTAFLQVITGDTPEP
VHPARRALAGRDAGDVFDRLMEVQQDLMRGDDGTGKYLSVNHSTLRKIAERKPASVHDLS
RIAGMGEKQIDRFGDAFLDVLREVG
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcgaacaccccgacacatctgcccttctgaaagccaccttcggctttgatgat
ttccgccccggtcaggcagagatcgtagaggctgtggcctcgggcaaggatgtgctggcg
atcatgcccacggggggcggtaagtccctttgtttccaattgcctgcgctgatgcgcgac
ggcgtgactgtggtgatctctcccctgatcgcgctgatgcgcgaccaagtgcggggcctg
cgcgaagcgggggttgaggcgggggctttgacgtccggaaacacgcccgaggaaaccgat
gccgtgtgggcggggctagaggccgggacgctgaagcttctgtacctcgcacccgaaagg
ctggcttcgtcgggcaccgagcggatgctatcgcgtgctggcgtgtcgatgatcgccgtg
gatgaggcccattgcgtcagtcaatggggccatgattttcgccctgattacctgcgctta
ggtgcgttgcggcgggccctcaacgtgccactcgccgccttcacagccaccgccgatgcc
gaaacccgcgccgagatttgtgagcgtctttttgacgccgagcctgacgttttcctgcac
gggttcgatcgccccaacctgacgttggcgttcgaggtcaagaaccagccgcgccagcag
atcctgtctttcgccgccgcccggaaggggcagtccggcatcgtctattgcggcacccgc
gccaagacggaaacgctggcccgcgccctgcgcgacgaaggccacagcgcctgccactac
cacggcgggatggaagccgaggatcgccgcattgtcgagactcggttcaaccaagaagac
ggcctgatcgtttgcgccacggtggctttcgggatgggcgtcgacaaacccgatatccgt
tgggtcgctcacgcagatctgcccaagtcgatcgaaggctattatcaggaaatcggccgc
gcgggccgcgacggcgcccccgctgatacgctcacgctttacggccccgatgatattcgt
ttccgccgtcagcaggtggacgagggactcgccccgccggaacgcaagaccgccgatcac
gcccgcctcaacgcgctgcttggcttggctgaagcgcaagggtgccgccgcaaggtgttg
ctgtcctacttcggcgatgcgtccgaggattgcggcaattgcgacctctgcgccaagccg
cccgagctgttcgatgcctcggttgccgtgcaaaaggcgctgtcggtgatgttgcgcacg
ggcgaatatttcggcgcgggtcacctgattgacgtgctgcttggggcgcagaacgaaagg
atcaaacagcgcggccatgatcgcctgtccacctacggcatcggcaccgaattcgacaaa
cgcggctggcaggccgtgttccgccagatgatgggccgcgaccttgtgcgccccgatccc
gaacgtcacggcgccttccgcatgacccaggccgcccgcccgattttgcgtggcgaggaa
agcatcaccctgcgcaaagacaccattgctaaggcgccgcgccgccccgccgtgaagatg
ctggtgagtgaggaagacgcgccactcatgtccgctctcaaagccaaacgccgcgccctg
gccgaggaggcccgcgtgcccgcctacgtgattttcaccgataagaccctgatcgagatg
gccgaaaagcgccccgcaaccctcgatgaaatggcccggatttccggcgtcggggccacc
aaactggaccgctatggcaccgcgtttctacaggtcatcaccggcgacacccccgagccc
gtccaccccgcccgccgggctcttgcgggccgagacgcgggcgatgtgtttgatcggctg
atggaggtccaacaagacctgatgcgcggcgacgacgggacgggtaaatacctgtcggtg
aaccattccaccctgcgcaagatagccgaacgcaagcccgcctcggtccatgacctctcg
cgcatcgcaggcatgggggaaaaacagatcgaccgctttggggatgccttcctcgatgtc
ctgcgagaggttggataa
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