Gymnodinialimonas sp. 57CJ19: AADW23_12780
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Entry
AADW23_12780 CDS
T10345
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
gyj Gymnodinialimonas sp. 57CJ19
Brite
KEGG Orthology (KO) [BR:
gyj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gyj03400
]
AADW23_12780
DNA repair and recombination proteins [BR:
gyj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AADW23_12780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
FtsK_SpoIIIE
AAA_22
ResIII
AAA_30
TrwB_AAD_bind
AAA
Zot
CbiA
T2SSE
Hydrolase
AAA_19
nSTAND3
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WZN77537
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Position
2595210..2596772
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AA seq
520 aa
AA seq
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MPEQVNNGIFVGGGGPDYGLAQLLRPDYANRHGLIAGATGTGKTVTLQILAESFSALGVP
VILSDVKGDLSGLAQAGSESFKLHGAFTERAQTINFADYAYRAFPVTFWDLFGEQGHPIR
TTVAEMGPLLLARLLDLSDAQEGVLNIAFRVADEEEWPILDLKDLQALLVWVGENRKTLS
LRYGNVSTASVGAIQRRLLVLDNEGGTGFFGEPALDLDDLFLTDEAGAGRINILAADKLM
QSPRLYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFEDAPKALVDKVEQVARL
IRSKGVGVYFITQNPADVPEDILGQLGNRVQHALRAFTAKDRRALQQAAENYRDNPAFDI
EDAIREVGVGEAVTSLLERKGIPGMAQRTLIRPPSSQLGPISATTRAELINQSPVAGKYE
AVQDRNSAYEILQQRAAAAAREAEQAEAKEEEAPPAEREYRAGRRYTGGGVSRSTSKPRR
RSSRSDSVGTAFAKSFARQMGTQSGRAVVRGILGGLFRGR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcaggtgaacaacgggattttcgtgggcggcggcgggccggattatggcttg
gcgcaactgctgcgccccgattacgcaaaccgccacggcctgattgcaggcgcgacggga
accggcaaaacggtcacgttgcagatcctcgctgaaagcttctcggccctgggcgtgccg
gtgatcctgtcggacgtgaagggcgatctctctggccttgctcaggccggatccgagagc
ttcaagctccacggtgccttcaccgagcgggcgcagactattaacttcgccgattacgct
taccgcgcgttcccggtcaccttctgggatctcttcggcgaacaaggccatccgatccgc
acgaccgtcgccgagatgggcccgctcctgctggcgcgccttctggatctgtccgatgcg
caggaaggtgtcctgaacatcgccttccgtgtcgccgatgaagaggaatggccgatcctc
gacctcaaggacctacaagcgctgctggtgtgggtcggcgagaaccgcaagacgctgtcc
ctgcgctacggcaatgtctcgaccgcttccgtcggcgccattcaacggcgcctcctggtg
ctcgataacgagggcggcacaggcttcttcggcgaaccggcactggacctcgatgatctg
tttctcaccgatgaggccggggcagggcggatcaacatcctcgccgccgacaagctgatg
cagtcgccgcgcctctatgcgaccttccttctctggttgctgtcagaattgttcgagacc
ctccccgaggtcggcgacccggacaaacccaagctggtgttcttctttgatgaggcccac
ttgttgttcgaggacgcccccaaggccctggtcgacaaggtcgagcaagtcgcccgcctg
atccgctccaaaggcgtgggcgtctactttatcactcaaaaccccgccgacgtgcccgaa
gatatcctcgggcaacttggcaaccgtgtccaacacgccctgcgcgccttcaccgccaaa
gaccgccgggctttgcaacaggccgcggaaaactaccgtgataaccccgctttcgatatc
gaagatgcgatccgcgaagtcggcgtgggcgaggcggtgacctccctgctggaacgcaaa
ggcatccccggcatggcgcagcgcacgctgatccggcccccgtcttcgcaactgggccca
atctccgcaacaacccgtgcggaactcatcaaccagtctccggtggctggaaaatacgag
gccgtacaggatcggaacagtgcctatgaaatccttcagcaacgcgccgccgccgccgcc
cgggaagccgagcaagccgaagccaaggaagaagaggcccccccggccgagcgggaatac
cgcgccggtcgtcgctacaccggcggcggcgtcagccgttctacctccaaaccgcgccgc
cgctccagccgctccgatagcgttggcaccgcctttgccaaaagctttgcccgccaaatg
ggcacccaatcgggccgcgccgtggtccggggcatccttggtggccttttccgcggccgc
taa
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