Gymnodinialimonas sp. 57CJ19: AADW23_14475
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Entry
AADW23_14475 CDS
T10345
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
gyj Gymnodinialimonas sp. 57CJ19
Pathway
gyj03018
RNA degradation
Brite
Enzymes [BR:
gyj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AADW23_14475
Messenger RNA biogenesis [BR:
gyj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AADW23_14475
Ribosome biogenesis [BR:
gyj03009
]
Prokaryotic type
rRNA processing factors
AADW23_14475
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Gene cluster
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Other DBs
NCBI-ProteinID:
WZN77859
LinkDB
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Position
complement(2957654..2960311)
Genome browser
AA seq
885 aa
AA seq
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MAKTMLIDATHAEETRVVVADGTKVDEFDFESLNKRQLAGNIYLAKVTRVEPSLQAAFID
YGGNRHGFLAFSEIHPDYYQIPIADREALLAEERAYAEQQAKEEEEESSKPKRRRRRRRS
DTKAEETGTDAVTTGTPSGMDVVDLDAADNPEAEASVEGLSPMELVKETPVEEPADDDAT
DAAPADDDATEDTADADASNDADSDDDDTDTETVADDDAEEDIRPIRKPRPKKYKIQEVI
KVRQIMLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKITNAADRKKLKD
IATALDVPQGAGLIVRTAGSQRTRSEIKRDYEYLQRQWEQIRELTLKSIAPAPIYQEGDL
IHRTIRDLYNRDIDEVIVEGEAGYRHAKDFMRMIMPSHAKKVKRHSGGVPLFAKYKVESY
LSDMFNPTVQLKSGGYIVINITEALVAIDVNSGRSTKEGSIEDTATKTNLEAAEEVARQV
RLRDLAGLIVIDFIDMDERRNNNAVEKRIKDKLKTDRARIQVGRISTFGLMEMSRQRLRP
GMLEATTQACHHCHGTGLVRSDDSLALSILRQLEEESTRGRSKEVLLTAPVGIVNYLINF
KRDYLDSIEARTGMAIRIEADASLVVPDFKLEKFKTATRKITAEVPVVSMDAALMDDIDE
DVADESDDAVEAPEEVRADDEQPKKKRRRRRGGRGRRRNGDETAENAEDGPQGTEEGAAE
ASADAPAEAQSEGDGEAKPEGEEQPKKRRRSRRGGRGRKSSETTTEGAEAEGSNADASAE
AEPAAETRPEPAAEPVAEAAPEAQPEAEAAPEPQAAPEAQPEATPVAEVEPAPEPEAAPE
AEPEPAPEPVAEETPEPAMAEAAVTPEPVAEAPAKPKRRGWWSRG
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacaatgctcatcgatgccacccacgcggaagaaacccgcgttgtggtggca
gatggaaccaaggtcgatgaatttgactttgagtcactaaacaagcggcagctcgcaggt
aatatttatttggcaaaggtaacgcgggttgaaccctcgttgcaggcagcctttatcgac
tacggcggaaaccggcacggtttcctcgccttctcggaaattcaccctgattactaccag
atcccgatcgcggaccgtgaagctctgctggccgaagaacgcgcctacgccgagcagcaa
gcgaaggaggaggaggaggaatcctccaagcccaagcgccgccgtcgtcgccgtcgctcg
gacaccaaggcggaagagaccggcaccgatgcggtgaccaccggaacgccttccggcatg
gatgtggttgatctcgacgctgccgataaccccgaagcggaagcttcggtcgagggtctg
tcaccaatggaactggtgaaagagacccccgttgaagaaccagccgacgacgacgccacc
gatgcggcgcctgccgatgatgacgcaaccgaagacaccgccgacgccgatgcctccaac
gatgctgacagcgacgacgatgataccgacacggaaaccgtggccgacgatgacgcggaa
gaagacatccgcccgatccgcaaaccgcgcccgaagaagtacaagatccaggaggtcatc
aaggtccgccagatcatgctggtgcaggtggtcaaggaagagcgtggcaacaaaggtgcg
gcgctgacgacttacctgagcctcgccggtcgctattgcgttctgatgcccaacacggcg
cgtgggggtggcatttctcgcaagatcaccaacgccgccgaccgcaagaaactgaaggat
atcgccaccgcgctcgacgtgccgcaaggcgcgggcctgatcgtgcgcacggcaggcagc
cagcgcacccggtccgagatcaagcgcgattacgaatacctgcaacgccagtgggaacag
atccgcgagctgacgctcaagtccatcgcgcccgcgccgatctaccaggaaggcgacctg
atccaccgtacgatccgcgacctctacaaccgcgacatcgacgaggtgattgttgaaggc
gaggcaggctaccgccacgccaaggacttcatgcggatgatcatgccgtcccacgccaag
aaggtgaaacgccactccggcggcgtgccgctgttcgcgaagtacaaggtggaaagctac
ctgtcggacatgttcaacccgacggtgcagctgaaatccggcggttacatcgtgatcaac
atcaccgaagcgctggtcgccatcgacgtgaactcgggccggtccaccaaggaaggcagc
atcgaggatacggcgacgaagaccaacctggaggccgctgaagaagtggcgcgtcaggtg
cgtctgcgcgaccttgccggcctgatcgtgatcgacttcatcgacatggacgagcgccgc
aacaacaacgccgttgaaaagcgcatcaaggacaaactgaagacggatcgcgcccgcatt
caggtgggccgcatctcgacctttggcctgatggagatgtcgcgccaacgtctgcgcccc
ggcatgttggaggccacaacgcaggcctgccaccattgccacggcaccggtctggtgcgt
tcggatgactctctggcgctgtcgatcctgcgccagttggaagaggaaagcacccgcggc
cgctcgaaagaagtcctgctgaccgcacccgtgggcatcgtgaactacctgatcaacttc
aagcgtgactacctcgacagcatcgaagcgcgaaccggcatggcgatccgcatcgaggcg
gacgcaagccttgtcgtgccggatttcaagctcgagaagttcaagacagccacccgcaag
atcaccgccgaggtacctgttgtctcgatggatgccgcgttgatggatgacattgacgaa
gatgtcgccgacgagtccgatgacgccgtggaagcgcccgaggaagtccgtgccgacgac
gagcagccgaagaaaaagcgccgtcggcgtcgcggtggccggggccgtcgtcgcaacggc
gacgagacggctgaaaacgccgaggacggcccgcagggcacggaggagggtgccgcggag
gcgtcagccgacgctcccgccgaggcgcagtccgagggggatggcgaagccaagcccgaa
ggcgaagagcagcccaaaaagcgtcgccgttcgcgccgtgggggccgtggccgcaaatct
tctgaaacgacaaccgaaggcgcagaagccgaaggcagcaacgctgatgcctccgcagag
gccgaacccgctgcggaaacgcgcccagagccagccgcagaaccggtagccgaagccgcc
cccgaagcgcagcctgaagccgaagccgcaccggagccgcaggccgcacccgaggcgcaa
ccggaagcaaccccggttgcagaggttgaacccgcccccgagccggaagccgcgcccgaa
gctgagccagagcctgccccggaacccgtggcagaagaaacgcccgagccagccatggcc
gaggccgctgtcacaccggaacctgtggcagaggcccccgccaagcccaaacggcgcggt
tggtggtcgcgcggctaa
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