Paenibacillus sp. Y412MC10: GYMC10_0008
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Entry
GYMC10_0008 CDS
T01100
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gym
Paenibacillus sp. Y412MC10
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gym03032
]
GYMC10_0008
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_0008
Enzymes [BR:
gym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GYMC10_0008
DNA replication proteins [BR:
gym03032
]
Prokaryotic type
DNA Topoisomerases
GYMC10_0008
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GYMC10_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ACX62318
UniProt:
D3E725
LinkDB
All DBs
Position
7835..10339
Genome browser
AA seq
834 aa
AA seq
DB search
MAEENFSQIKDRDIGTEMRESFMDYAMSIIVSRALPDVRDGMKPVHRRILYAMSELGMAP
DKPHKKSARIVGEVIGKYHPHGDSAVYESMVRMAQDFSMRYMLVDGHGNFGSIDGDMAAA
MRYTEARLSKIAMEMLRDINKETIDFAPNYDGEEQEPVVLPARYPNLLVNGVSGIAVGMA
TNIPPHNLGEVIDGVQAMIRNPDITPMELMEYIQGPDFPTAGYILGREGIRQAYRTGRGS
VTMRAKATIEENNNKARIVVHEIPYQVNKARLVEKIAELVREKRIDGITDLRDESDRNGM
RIVIELRRDVNPNVVLNNLYKHTAMQSNFGINMLAIVNNEPKILNLRDVLFHYLEHQVTV
IRRRTEFELKKAEARAHILEGLRVALDHLDEVIALIRASQTTEAAREGLMERFGLSHEQA
QAILDMRLQRLTGLEREKIENEYQELLARIAELREILANEHLVLQIINDELQEIKERFAD
ERRTEITVGEDSILDEDLIPREEVIITITHTGYIKRLPANTYRSQKRGGRGVVGMDTKSE
DFVEHLFVTNSHHYLMFFTDKGKAYRLKAYEIPELSRTARGTPIINLIQIEQGESINAVI
PVENFDSDNYLFFATRQGVVKKTPLEDYVNIRKGGLIAINLREDDSLIEVKLTDGQQEII
MGTAQGMSIRFKESDVRSMGRSATGVKGITLDDNDEVIGMDVVDQELDILIVTTKGYGKR
TPASDYRSQTRGGKGIKTINITEKNGPVVALKVVKSEEDLMIITASGTIIRTSMEGISTM
GRYAQGVKLINIREDDAVGTVCRADKSDEPDADEEGEVGQDGAEPIEPAEPTEE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaaatttctcccaaatcaaagatcgggacattggtaccgagatgcgcgag
tcctttatggattacgcgatgagcatcattgtcagccgggctttgccggatgtacgggac
ggaatgaagccagtacaccgtcgtattctgtatgcgatgtccgaacttggaatggctccg
gataaaccgcataagaaatcggcaagaatcgtaggcgaagttattggtaagtaccatcct
catggtgattccgcagtttatgaatccatggtccggatggcgcaggacttctccatgcgt
tacatgcttgttgatgggcacgggaacttcggttccatcgacggcgatatggcagcggct
atgcggtataccgaggctcgtttatcgaagattgccatggaaatgctgcgtgatattaat
aaagagacaatagactttgctccgaactatgacggcgaggagcaggagccggtggttctt
cctgcgcgttatcctaacctgctggtaaacggcgtgtcggggatcgcggtagggatggct
accaatattccgcctcacaatcttggtgaagtcatcgatggtgtacaggcgatgattcgt
aaccctgacatcacgccgatggagttgatggaatacatccaaggaccggatttcccgaca
gcgggttatattctgggacgcgaaggcattcgccaggcttatcgtacgggccgcggttcc
gttacgatgcgggcgaaggcgacgatcgaagagaataataacaaggcgcgcattgtggtt
catgagattccatatcaagtgaacaaggcccgtctggttgagaaaattgcggaattggtt
cgcgaaaaacgaattgacggcattacggatctgcgcgatgaatcggaccgtaacggcatg
cggatcgttattgagctgcgccgggacgtcaacccgaatgtcgttttgaataacctgtac
aagcatacggccatgcagtcgaatttcggcattaatatgctggccatcgtgaacaacgaa
ccgaagatcttgaacctgcgcgacgtgctgttccactatttggagcatcaggtcaccgtt
atccgccgccggacagagttcgaacttaagaaggcggaggcccgagctcatattctcgaa
ggtttgcgtgtcgcactggatcatctcgatgaggtcattgccctcattcgcgcttcccaa
accacagaggctgcccgcgagggcttgatggagcgtttcggtctcagtcatgagcaggca
caggccattctggatatgcgtctgcagcgcctgaccggactagaacgagagaagatcgag
aacgaatatcaggaattgcttgccagaatcgcggaactccgtgaaatcttggctaatgag
catcttgtgcttcagatcatcaatgatgagctgcaagagattaaggaacgcttcgcggat
gaacgccgtactgaaattacggtcggggaggacagcatcctggacgaggatctgattccg
cgcgaagaagtgatcatcaccattacgcatacgggttacatcaagcgtctgcctgcgaac
acctatcgcagccagaagcggggcggacgcggcgttgtggggatggatacgaagagcgag
gactttgtcgagcatctcttcgtcacgaattcccaccattacctgatgttctttacggac
aaagggaaggcgtaccggttaaaagcctatgaaattccagagctgagccgtaccgcccgc
ggaacgccgatcatcaacctgattcaaattgaacagggcgaatcgatcaatgccgtgatt
ccggtggagaactttgacagcgataattacctgttctttgcaacacgccagggtgtcgtt
aagaaaaccccgcttgaggattatgtgaatatccgcaagggcggtctgatcgcgattaat
ctgcgcgaggacgattccctaatcgaggtgaagctgacggacggtcagcaagaaatcatt
atgggaacggcgcaaggaatgtccatccgcttcaaggagagcgatgtccgctcgatggga
agaagcgcgaccggggtgaaagggatcacgctggacgacaatgatgaagtcattggcatg
gacgtagtagaccaggagcttgatatcctcattgtaacgaccaaaggttacggcaagcgg
acgcctgcaagcgactaccgcagccagacccgtggcggtaaagggatcaagaccatcaat
attacggagaagaatggaccggttgtggcactgaaggtcgtgaaatcggaagaagacctc
atgatcattacggcaagcggcaccatcatccgtacgagcatggagggcatctccaccatg
ggccgctatgctcaaggcgtgaagctgatcaacatccgcgaggacgatgccgtaggtacc
gtctgccgtgcggataagagcgatgagccggatgccgacgaagagggagaagtaggccaa
gacggcgcagaaccaatcgagccggccgaaccgaccgaagaataa
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