Paenibacillus sp. Y412MC10: GYMC10_0044
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Entry
GYMC10_0044 CDS
T01100
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
gym
Paenibacillus sp. Y412MC10
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gym03032
]
GYMC10_0044
03036 Chromosome and associated proteins [BR:
gym03036
]
GYMC10_0044
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_0044
DNA replication proteins [BR:
gym03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GYMC10_0044
Chromosome and associated proteins [BR:
gym03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GYMC10_0044
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GYMC10_0044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ACX62354
UniProt:
D3E761
LinkDB
All DBs
Position
50915..51187
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTDLINNISGKSGLTKKDVENVLNGFLGEITEALANGDKVQLIGFGTFETRKRAGRTG
RNPQTGNTIEIPESNVPAFKAGNKLKEAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatctgatcaacaacatttccggtaaaagtggattgactaaaaaagac
gtagagaacgtcctgaacggcttccttggcgaaatcacggaagctttggctaatggcgat
aaagttcaattgatcggcttcggtacattcgaaactcgcaagcgcgctggacgcacaggc
cgcaacccgcaaacaggcaacacgatcgaaattccagaatccaacgttcctgcgttcaag
gcagggaacaagcttaaagaagctgtaaaataa
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