Paenibacillus sp. Y412MC10: GYMC10_0076
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Entry
GYMC10_0076 CDS
T01100
Name
(GenBank) pyridoxine biosynthesis protein
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym00750
Vitamin B6 metabolism
gym01100
Metabolic pathways
gym01240
Biosynthesis of cofactors
Module
gym_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GYMC10_0076
Enzymes [BR:
gym01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GYMC10_0076
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Motif
Pfam:
SOR_SNZ
ThiG
NMO
Dus
IGPS
NanE
His_biosynth
FMN_dh
TetR_C_27
Rad52_Rad22
Motif
Other DBs
NCBI-ProteinID:
ACX62386
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Position
88852..89733
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AA seq
293 aa
AA seq
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METGTSTVKRGMAEMQKGGVIMDVMNAEQAKIAEAAGATAVMALERVPSDIRAAGGVARM
ADPTIVEEVMKVVSIPVMAKARIGHYVEAKVLESLGVDYLDESEVLTPADEVFHIDKWDF
TVPFVCGAKDIGEALRRIGEGASMIRTKGEPGTGNIVEAVRHMRLINSQIRKVRNMSKDE
LYAEAKNLGVSYDLLKGVHETGKLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKS
DNPEKFARAIVEATTHYDDYKLIAEVSKNLGAPMKGIEISKLSPAERMQDRGW
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaggaacatctactgtaaaaagaggtatggcggaaatgcaaaaaggcggcgtc
attatggacgtcatgaatgcggaacaagcgaaaatcgctgaagctgccggtgctacggca
gttatggcgctggagcgcgttccttccgatattcgcgctgctgggggagtagcacgtatg
gctgacccaaccatcgttgaggaagtaatgaaggtcgtatccattccagttatggccaaa
gctcgtatcggtcattacgttgaagcgaaagtgcttgaatctctcggcgtggattacctc
gatgagagtgaagtgctgacgcctgcggatgaagtgttccacatcgataaatgggatttc
accgtaccgttcgtatgcggcgcgaaagatatcggtgaggcattgcgtcgtatcggcgag
ggtgcatccatgatccgcacgaagggcgagccgggaacgggcaatatcgtggaagccgtt
cgccatatgcgtttgatcaacagccaaattcgcaaggttcgcaacatgtcgaaggacgaa
ctgtatgccgaagccaaaaacctcggtgtttcctatgacctcctgaaaggcgttcacgag
acgggcaagctgcctgtcgttaactttgccgccggtggcgtggccacccctgcggatgcc
gcattgatgatgcatctgggcgctgatggcgtttttgtaggatccggtattttcaaatcc
gataaccctgagaaatttgctcgtgcgatcgtggaagcgacaacgcattatgatgattat
aaattgattgctgaagtatccaagaacctgggtgctccaatgaaaggcatcgagatatcc
aagcttagtccggctgagcgcatgcaggatcgcggctggtaa
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