Paenibacillus sp. Y412MC10: GYMC10_0111
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Entry
GYMC10_0111 CDS
T01100
Name
(GenBank) oligogalacturonide lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym00040
Pentose and glucuronate interconversions
gym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GYMC10_0111
Enzymes [BR:
gym01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
GYMC10_0111
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
ACX62420
UniProt:
D3E848
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Position
129218..130363
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AA seq
381 aa
AA seq
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MAKGTVWKPERKQYRDRLTGVEVVQLTDYKAHSHHLYFTENGWYDGSKRLLFVSDRENSS
NLYSMDVNSGEMLQLTDYPDNDFVDACLLPDGRAAFVKTGRSVRRLDLVTLEEELVYEAP
EGYNIGNLSCPADGRSVVTCIQEDLSHRMQLDLGNGYVGHRELMEAAPHSRIVRIDSEGQ
TQPETLYDAHRFITHINASPVEPWLITFCHEGPWHLVDHRIWGLDLRNGEVWRIRQRLEP
GEKVGHEFFYPDGVTIGYHGFRTDGTNFFGSIRYDNTAMEETDFGFDTWHAYADGLGQAV
VDGKGAVKTLSVWRKDAQGVYQGPRMLCELRCSFHSQKVHAHPRFDPDGKRLLFTSDKNG
YGNLYLVDMPEDFDSLPLQSV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggccaagggaacggtgtggaagccggaacgtaagcagtatcgcgaccggttgaccgga
gtcgaagtggtgcagctgaccgactataaggctcatagtcatcatctatattttacggag
aacggatggtatgacggcagcaagcggctgttgttcgtatcggatagggaaaacagttcg
aacttgtacagcatggatgtcaacagcggcgaaatgctccagctgacggattaccccgac
aatgattttgtggatgcctgtctgttaccggatggccgggccgccttcgtcaaaacgggt
cgaagcgtacgccgccttgatctggtgacattggaggaagagcttgtctacgaagccccg
gaggggtacaacatcggcaacctgagctgtcctgccgatggccgttcggtcgtcacctgc
atacaggaggatctatcccatcgtatgcagctagatctcggcaatggctatgtcggccac
cgggagttgatggaggctgctcctcacagccggatcgtgcggatcgattcggaagggcag
acgcagccggaaaccctatacgacgcccatcgctttataacccatattaatgcgtcaccc
gtcgaaccatggttgatcaccttttgccacgaagggccgtggcatttggtcgatcaccgg
atatggggactggatcttcggaacggagaggtctggagaattcgccaacgccttgaaccc
ggagaaaaggtcggccatgagtttttttatcctgacggcgttaccatcggttaccatggc
ttccgtacggatggaaccaatttcttcggaagcatccggtatgacaatacggccatggaa
gagacggatttcgggtttgatacgtggcatgcgtatgcggacggcctcggtcaggccgtt
gtcgacggcaaaggggcggtcaaaaccctctccgtatggcgtaaagacgctcaaggagtt
taccaagggccgaggatgctgtgcgagctccgatgcagttttcattcccagaaggtgcac
gcgcatccgcgttttgatccagacggtaaacgactcttgttcacaagcgataaaaatggt
tatggcaatttgtacctggtcgacatgccggaagatttcgattcgctgccgctgcagtcg
gtctaa
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