Paenibacillus sp. Y412MC10: GYMC10_0180
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Entry
GYMC10_0180 CDS
T01100
Name
(GenBank) conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
gym
Paenibacillus sp. Y412MC10
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gym03019
]
GYMC10_0180
Messenger RNA biogenesis [BR:
gym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GYMC10_0180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_22
Class_2_docking_dom
AAA_33
AAA_16
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ACX62488
UniProt:
D3E8B6
LinkDB
All DBs
Position
200963..201871
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AA seq
302 aa
AA seq
DB search
MLEAADRGSNTSSMATLIIITGMSGAGKTLAVQSLEDLGFFCVDNLPPVLIPKFAELIDQ
SKGKIGKVALVIDLRGREFFTALSESLNYIKDHFTIHCEILFLDATDSVLVQRYKESRRR
HPLAPEGMPLDGIRLERKMLDELKNSATQVIDTSNMKPVRLKEKIISRFTHLESSTLSVN
ITSFGFKYGIPIDADLVFDVRFLPNPHYVEHLRPNTGQNSDVYEYVMKWPETQAFLTKLL
DMLHFLIPQYRKEGKSQVIIGIGCTGGKHRSVAIAEYLGKMLGVSETETVSVSHRDSERD
RH
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagcagccgatcgcggcagcaacacatcatccatggccaccctgatcatcatc
accgggatgtcgggagcaggtaagaccttggccgtacaaagtctggaggatcttggattc
ttttgcgtcgataacctgcccccggtgctcattccgaaattcgcggagctgatcgatcaa
tcgaagggtaagatcggcaaggttgcattggtcatcgacctgcgtggccgcgaatttttc
accgctttatcggagtcgctgaattacatcaaggaccacttcaccatccactgcgagatt
ctgttcctggatgccacggactccgtgcttgttcagcgttacaaggaaagccgtcgccgc
catccgctcgctccggaaggcatgccgcttgacggtatccgattggagcgcaaaatgctg
gatgaactgaagaattcggccacccaggtcatcgataccagcaacatgaagcctgtgcgg
ttgaaggagaagatcatctctcgcttcacgcatttggagagcagcacgttatcggtcaac
attacatcttttggatttaagtacggtattccgattgacgccgatctggtgtttgatgtg
cgttttctgcccaatccgcattatgtggagcatctgcggcccaataccggccaaaacagc
gatgtatacgagtacgtcatgaaatggccggagacgcaagcttttctgaccaaactgctc
gatatgctgcatttcttgatcccgcagtaccgcaaggaaggcaagagtcaggtgatcatc
ggcattggctgtaccggcgggaagcatcgttccgtagcgattgccgagtatctcggcaaa
atgctgggcgtcagcgaaacggagacggtatcggtgagccaccgcgattctgagcgggat
cggcattaa
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