KEGG   Paenibacillus sp. Y412MC10: GYMC10_0223
Entry
GYMC10_0223       CDS       T01100                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
gym  Paenibacillus sp. Y412MC10
Brite
KEGG Orthology (KO) [BR:gym00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gym03400]
    GYMC10_0223
Enzymes [BR:gym01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GYMC10_0223
    5.6.2.6  RNA 3'-5' helicase
     GYMC10_0223
DNA repair and recombination proteins [BR:gym03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GYMC10_0223
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WH_Lhr Cas3-like_C_2 UvrC_RNaseH
Other DBs
NCBI-ProteinID: ACX62531
UniProt: D3E980
LinkDB
Position
257307..259526
AA seq 739 aa
MSANPFSRLAPFIQEFIYKKRWDTLREAQVEACRVLFDTPNHLLIASGTASGKTEAAFFP
ALTELYNMPSSSVGILYIGPLKALINDQFERITDLLKEGQVPVWHWHGDVSQAEKTKLMQ
KPSGVLQITPESLEGLLMNRPNAIPALFQDLRYVIIDEVHAFMGADRGIQVLSQLTRIER
MASCSPRRIGLSATLSDYETAAGWLGAGTKHAVEVVSPQGGRKLRLSVEHFSFPDARDEK
QAEQLELARKAYYDFVYDNTHLKKALVFTNSRSDAELTTLELRRIAAKREQRDVFHVHHG
SISAMLREEAEAALREGPGPAVAAATLTLELGIDLGELERVIQLGAPYSCSSFVQRLGRS
GRRGDQASEMMFLCPEDEDEEAMLPARMPWMLLRAIAVIELYIREKWVEPLALRKKPVGV
LYHQTMSTLKSMGEAEPPDLARAVLTLPAFRGIEPEEYKEFLQYLLQTDHIQRTEEGSLI
IGLGGEKIVNNYRFYAVFKDDEEHVVYNGSEEIGSITTVPPPGYCFSLAGKLWKVEEVDT
KHKALYVKSAKGKVDTLWLGAGGDVHTRVVQKMREVLAVSAIYPYLAPGAVNRLERARRL
ARESGLLKQVVIPAGGDSLFILPWAGSKQFRTLERLLKHNLSERLALRSIVPMEPYYMVV
AGKVDNETLMEEIKQELANCEDAGALLDPDEAPYLGKYDEFVPPKLVRTAFAADGLDLEG
LAEALGLARGAAGRGVADV
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgagtgcgaatcctttttccaggttggccccgttcattcaggagtttatctataaaaaa
agatgggacacccttcgcgaggcgcaggtggaagcctgccgcgtcctgttcgacacgccc
aatcatctgctgatcgcttccggcacggcatcgggcaagaccgaagccgcattcttcccg
gcgctgacggagctgtacaacatgccttccagctcggtcgggatcctgtatatcgggccg
ctaaaggcactgatcaacgaccaattcgaacggatcaccgatctgctgaaggaaggccag
gtgccggtatggcattggcacggcgacgtgtcccaagccgagaaaacgaaactcatgcag
aagccgtcgggcgtgctgcagattacgccggaatcgcttgaagggctgctcatgaaccgg
ccgaacgccatcccggcgctgttccaggatttgcggtatgtcatcattgacgaggtgcat
gccttcatgggagccgaccggggcattcaggtgctgagccagctgacccggatcgagcgg
atggcttcctgttcgcctcgccgcatcgggctgtcggcaacgctcagcgattacgagacc
gcagccggctggctgggcgcaggcacgaagcacgcggtcgaggtcgtttcgccgcaaggg
gggcggaagctgcggctgtcggtcgagcatttctccttcccggatgcgcgggacgagaag
caggcggagcagctggagcttgcgcgcaaggcctactacgatttcgtatacgacaacacc
cacctgaaaaaagcgctggtcttcaccaacagccgctcggatgccgagctgaccacgctc
gagctgcggcggattgcggccaagcgcgagcagcgggatgtcttccatgtgcatcatgga
agcatctccgcaatgctgcgcgaggaagccgaggccgcgctccgcgaaggtccggggccg
gcggttgcggcggccaccctgacgctggagctcggcatcgatctcggcgagctggagcgg
gtgatccagcttggtgcgccgtacagctgctccagcttcgttcagcggctgggccgctcc
ggccggcggggggatcaggcctccgagatgatgttcctctgtccggaggacgaggacgag
gaggccatgctgcctgcgcgcatgccgtggatgctgctccgggccattgccgtcattgag
ctgtatattcgcgagaaatgggtcgaaccgctggccctgcggaagaaaccggttggcgtg
ctttaccatcagacgatgagcacgctcaagagcatgggcgaggccgagccgcccgatctg
gcgcgagcggtgctgacgctcccggccttccgcggcatcgagccggaggaatacaaggag
ttcctgcagtatttgctccagacggatcacatccagcgtacggaagaaggcagcctgatc
atcggccttggcggggagaaaatcgtgaacaactaccgcttctatgcggtgtttaaggac
gatgaagaacatgtcgtctataacgggtcggaagaaatcggatcgattacgaccgtgccg
ccgccgggctactgcttctcgctggcaggcaagctgtggaaggtagaggaagtcgacacg
aagcacaaggccctgtacgtgaagtcggccaagggcaaggtcgatacgttgtggcttggc
gcaggcggcgatgtgcatacccgcgtggtgcagaagatgcgggaggtgctcgctgtcagc
gccatctatccatacctggcaccgggtgcggtgaatcgcctggaacgggcccgccgactt
gctcgggagagcggactgctgaaacaggtggttataccggcgggcggcgactccctgttc
attctgccttgggcgggcagcaagcagtttcgcacgctggagcgattgcttaagcataat
ctgtcggagaggctggctctccgctctatcgtgccgatggagccgtattacatggtggtc
gcgggcaaggtcgataacgaaacgctgatggaagaaatcaagcaggaattggcgaactgc
gaggacgccggcgcgcttctcgatcctgacgaagcgccgtatctcggcaaatatgacgag
ttcgtcccgccgaagctcgttcgcaccgcttttgccgccgacggactggatctggagggg
ctggcagaggcgctggggctggcacgtggagcagcgggaaggggagttgcggatgtgtga

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