Paenibacillus sp. Y412MC10: GYMC10_0263
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Entry
GYMC10_0263 CDS
T01100
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym00061
Fatty acid biosynthesis
gym00071
Fatty acid degradation
gym01100
Metabolic pathways
gym01212
Fatty acid metabolism
gym02024
Quorum sensing
gym04146
Peroxisome
Module
gym_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GYMC10_0263
00071 Fatty acid degradation
GYMC10_0263
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GYMC10_0263
09145 Cellular community - prokaryotes
02024 Quorum sensing
GYMC10_0263
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gym01004
]
GYMC10_0263
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gym04147
]
GYMC10_0263
Enzymes [BR:
gym01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GYMC10_0263
Lipid biosynthesis proteins [BR:
gym01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GYMC10_0263
Exosome [BR:
gym04147
]
Exosomal proteins
Exosomal proteins of breast milk
GYMC10_0263
Exosomal proteins of breast cancer cells
GYMC10_0263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
TTC5_OB
AMP-binding_C_2
DUF5000
Motif
Other DBs
NCBI-ProteinID:
ACX62570
LinkDB
All DBs
Position
305110..306786
Genome browser
AA seq
558 aa
AA seq
DB search
MDTKPWLPFYPPEVAPAFDYPKQNLALFLVTSAQKFPNRPALYFMGKTINYRSLLDASYR
MANALRSKGIKKGDRVAIMLPNCPQVVISYYGVLLAGAVAVMTNPLYMEREIAHQMKDSG
AKIIITMDMFVSRVEKVIEETELEHMIVTSVADYLPFPKNLLYPIKAKKEGPLPVVDYGS
RVHAFKKLLAGAPNDPVCESVKAEKDLALLQYTGGTTGVPKGVMLTHMNLIANTVQSANW
CFQVEDGKERYLAVLPCFHVFGLTVLLNQAIYRAGMLILVPKFEVTMILNLIKKMKPTLF
PGAPTMYIALINHPKIREYDLSSINACVSGSAGLPVEVQDKFEELTKGRLIEGYGLTEAS
PVTHVNPIWGRRKIGTIGVPVPDTDAKVVDPETGEEMPVGEPGELIVKGPQVMMGYWNRP
EETFDTLRNGWLFTGDMATMDEEGYFTIIDRKKDMIIASGFNIYPREIEEVLYEHPSVKE
AVVVGTKDDYRGETVRAYIVLKDGASPDPSGLEKFCRSQLAAYKVPREYVFRDSLPKTMV
GKVLRRKLLEEEEEGKTG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaagccttggctgccgttttatccgcccgaagtagcccccgcttttgattat
ccgaaacagaatttggcattatttctcgtaacctcggcgcagaagtttccgaatcgtccg
gccctgtatttcatgggaaagacgatcaactacagaagtctgctggatgcgtcctaccgg
atggcgaacgcgctccgcagcaaagggatcaagaagggcgaccgggtagcgatcatgctg
cccaactgcccgcaggtcgttatttcctattatggcgtgctgctcgcaggagccgtggcc
gtcatgaccaacccgctctatatggagcgggaaattgcgcatcagatgaaggattccggt
gccaagatcatcattacgatggatatgttcgtatcccgcgttgaaaaagtcatcgaggag
acggaactggagcatatgatcgtcacgtccgtggcagattatctgccgttccccaagaat
cttctctacccgatcaaagccaagaaggaaggccctcttccggtcgtcgactatggaagc
cgcgtccatgctttcaaaaagctgcttgcgggcgcgccgaatgatcccgtctgcgaatcc
gtgaaagcggagaaggatttggccctgctccagtatacaggcggcacgacaggcgttccc
aaaggcgtcatgctgacgcatatgaatctgatcgccaacaccgtgcagtccgcgaactgg
tgctttcaggtggaggacgggaaggagcggtatttagccgttctgccgtgctttcacgtg
ttcggtctcaccgtgctgctgaaccaggcgatctatcgtgccggcatgctgatattggta
ccgaaattcgaagtgacgatgatcctgaacctgatcaaaaaaatgaagccgacgctcttc
ccgggcgccccgaccatgtatatcgcattgattaatcatcccaagatcagggaatacgac
ctctcttcgatcaatgcctgcgtcagcggctctgccgggcttccggtcgaggtgcaggat
aagttcgaggagctgaccaaagggcggctgatcgaaggctacggcctgaccgaagcatcc
ccggttacccatgtgaatccgatatggggaaggcggaagatcggcaccatcggcgtcccc
gttccggatacggacgcgaaggtcgtggatccggagacgggcgaagaaatgccggtcggc
gagcctggcgagctgatcgtgaagggaccgcaggtgatgatggggtactggaaccggccg
gaggagacgtttgatacgctccgcaacggctggttgttcacgggcgacatggccacgatg
gacgaagaggggtattttacgatcatcgaccgtaagaaagacatgatcattgcaagcggt
ttcaatatttatcctcgggagatcgaggaagtgctgtatgagcatccgtccgtgaaggaa
gccgtcgtggtcggaacgaaggacgattatcgcggcgaaaccgtaagagcttatattgta
ctgaaggacggcgcgtctccggacccttcgggcctggagaaattctgccgcagccagctg
gcggcctataaagtgccgcgcgagtacgtgttccgcgattcgctgccaaagacgatggta
ggcaaggtgctacgccgcaagctgctggaggaagaagaggaaggcaaaacaggctaa
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