Paenibacillus sp. Y412MC10: GYMC10_1378
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Entry
GYMC10_1378 CDS
T01100
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYMC10_1378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_1378
Enzymes [BR:
gym01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
GYMC10_1378
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYMC10_1378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACX63664
UniProt:
D3EJJ2
LinkDB
All DBs
Position
1637466..1637981
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AA seq
171 aa
AA seq
DB search
MDEVSDHLDYGLTLVFIGFNPSLRSGEVGHHYANPRNNFWRILHKSGLTPRLYEAAEDGE
LLKLGYGFTNIVARPTRGAEDITREEYRLGRETLRKKLEEYRPEVACFVGKGVYTEYSGK
AKADWGIQPDSVVDGVREFVAPSSSGLVRMPMDEIIGIYRQLHDWISRNEF
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
ttggacgaagtcagcgatcatctggattatggattaacccttgtatttatcggctttaac
ccgagtctgcgatcgggcgaagtggggcaccattacgcaaacccgcgcaacaatttttgg
aggatcctgcataagtccggtttgactccacgcttatatgaagccgcagaggacggggaa
ttgcttaaactgggttatggattcaccaatattgtagccaggcccacccggggcgcggaa
gacattacccgcgaagagtataggctcggaagagagacgctgcggaagaagctggaggaa
tacagaccggaggttgcctgttttgtcggcaagggcgtgtataccgaatacagcggcaag
gccaaggcggactggggaatccagccggactccgtcgtagacggagtccgtgagtttgta
gctccatcgtccagcgggctggtgaggatgcccatggatgaaataatcggaatttacagg
cagctgcatgattggatatcgaggaacgagttctga
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