Paenibacillus sp. Y412MC10: GYMC10_1750
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Entry
GYMC10_1750 CDS
T01100
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gym
Paenibacillus sp. Y412MC10
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_1750
Enzymes [BR:
gym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYMC10_1750
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GYMC10_1750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ACX64033
UniProt:
D3E506
LinkDB
All DBs
Position
2062197..2065727
Genome browser
AA seq
1176 aa
AA seq
DB search
MSVQFVIGRSGSGKSTSIRQEMIERLEHNPKGDPMILIVPEQGSYEAEHALVNAGGIRGM
MRAQVLSFRRLAYRVMQETGGAAKVAISEEGKRMLLYKILRRRKEELHMFGASGEQHGFV
GKLSELYTEMKRYCIDASCVEEQLGQMVSGSGNSPMLRRKLEDIVTVFRDFEVEISRFYM
DEEDTLASLAEGVTESEYIKRADIWIDGFHGFTPQEYRVLQEIIVHAKRVTIALTLDKPY
RNGTVPHELDLFHPTAVTYIKLKGIIDEIGLEAEHRILHPDVLPRFQESPMLAHLERGYD
RKKRWAEPDEGPDTASSPNRGRKGLLLHAASHRRAEIEGALREMLRLAQEEGARYREMAV
FVRNMGDYEHLMGPLFREYGVPYFLDQKRSELHHPLVEFIRSALDVIGRRWRYEDVFRCV
KTDLLLPLDGSLTREDMDRLENHVLASGIQGTRWTDGRPWKGVPSLSLEEGESEIRNQDG
MAAIEYARKVITEPLHAFEKRMKKAASATDQSTAVYRLLEECAVPEKLELLSRAALDAGR
PEEAREHRQVWGAVLGLLDQIVEMMGAEKLSTELFTGVLGTGLTEMKMALVPPSLDQVLI
GSMDRTRTGGVKYAFLLGINDGVLPAQFQDDGILTEPERVHLEDRGLELAPSISRRLLDE
RFLIYNALTSASKQLWVSYPAADDEGKPLLPSEVVRHLKLMFQLEEEPLFPRPHAGQSAL
EQEGYAVRPDKTLAYLAGRLRDWRNGEEIPDLWWHVYNWYAEQPGLRPRLTTMLSSLSYR
NEARPLKLETSRQLYGTKLRTSVSRMERFVACPFSHFASHGLKLRERQLYRLQAPDIGQL
FHAALSSMAVKFQSQHRSWGDLTAEECLREAEATVDRLAPMLQGEILLSSKRYGYISRKL
KNIVGRASVILGEQARRGKFEPIGLELDFGPGKPLPPLAFELPNGTKMEIVGRIDRVDMA
RGEHGIMLRVIDYKSSQKDLRLHEVYYGLSLQMLTYLDVLLTFAEEWLGEQALPAGTLYF
HVHDPVLQSANGMTPEQAAEELLKRYKMKGLLLADREAVSLMDSFLEKGHSAILPVAVKT
DGSFYSSAAVATPDQWETLLSTVRENMLNIGSRITGGDVAIKPYRIQQETACTFCSFRPV
CQFDDAIEGSEYKLLGKPGKDQVWDMLGHPKGGESR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcaatttgttatcggcaggtcgggcagcggcaagagcacgtcgatccgccaa
gagatgatcgaacggttggagcataatcccaagggggatccgatgatcttgatcgttccg
gagcaaggctcctatgaagcggagcacgcgctcgtcaatgcgggaggcattcgcggcatg
atgcgcgcgcaggtgcttagcttccgccgtctggcttaccgcgtcatgcaggaaaccggc
ggagccgcgaaagtggcgatcagcgaggaaggcaagcggatgctgctgtataaaattctg
cggaggcgcaaggaagagctccacatgttcggcgcctcgggagagcagcatggctttgtc
ggcaagctgagcgagctgtacacggaaatgaagcgctattgcattgacgcctcatgcgtg
gaggagcagctgggacagatggtatccggctccgggaattcaccgatgctgcggcggaag
ctggaggacatcgtaacggtctttcgcgatttcgaggttgaaatttcacggttttacatg
gatgaggaagacacgctggcctcattggctgagggtgtgaccgaatcggaatatatcaag
cgtgccgacatctggatcgacggcttccacggctttacgccgcaggagtaccgggtgctg
caggagatcatcgtgcatgccaagcgagtgacgatcgcgctgacgctggacaagccttac
aggaacgggacggttccgcatgagctggatctctttcatcctactgcggtgacgtacata
aagctcaaagggattatcgatgagatcgggctggaggcggagcaccgcattcttcatccc
gatgttctgccgcggtttcaggaatctcccatgcttgcccatctcgagcgcggttatgat
cggaagaagcgctgggcggaaccggatgaaggcccggacacagcgagcagtccaaaccgc
gggaggaaaggtctgcttttacacgctgccagccatcgccgggccgaaatcgaaggagct
ctgcgcgaaatgctgcggctggcacaggaggaaggggcaagataccgcgaaatggctgtt
tttgtccggaatatgggggactatgagcatctgatgggtcctttgttcagggaatacggc
gttccttattttctcgatcagaagcggagcgagcttcaccatccgctggtcgagttcatt
cgctcagcgcttgatgtcatcggacgccggtggcgttatgaggacgtattccgctgcgtg
aagacggatctgctgctgccgctggacggttcgcttacccgtgaggacatggaccgtttg
gagaaccatgtgctggcttccggaatccagggcacgcgctggacggacggccgtccctgg
aagggagttccaagcctttctttagaagagggggaaagcgagatccgcaatcaggacggc
atggcggcgatcgagtacgccaggaaggtgataacggaaccgctgcatgcgttcgagaag
cggatgaaaaaggctgcgagcgcgacggatcagagcaccgcggtctatcggctgctggag
gagtgcgctgtgcccgagaagctggagctgttaagccgggctgcactggatgccgggcgt
cctgaggaagcccgggaacatcgccaggtatggggagccgtgctcggcctgctcgaccaa
atcgtcgagatgatgggcgcggagaagctaagcaccgaattgtttaccggcgtgctgggt
acgggacttacggaaatgaaaatggctcttgtgcctccgtctctggaccaggtgctcatc
ggcagcatggaccggacgcggacgggcggggtgaaatatgcttttcttctgggcattaac
gacggcgtgctcccggcccagttccaggatgacggcatcctgacggagccggaacgggtt
catcttgaagaccgcgggctggagcttgccccgagcatatcccgaagactgctggatgaa
cggtttctgatctacaatgcgctgacttcggccagcaaacagctgtgggtcagctaccct
gcagcggatgatgaaggcaagccgttactgccatccgaggtggtgcggcatctgaagctg
atgttccagctggaagaggagcctttgtttccaagaccgcatgccgggcaatcggccctt
gagcaggagggttatgcggtccgtccggacaagacgcttgcttatttagcgggccggctt
cgcgactggaggaatggggaggagatcccggatttgtggtggcatgtttacaactggtat
gcggagcagccgggtttgcggccccgcctcacgaccatgctctcctccttgtcttaccgg
aatgaagcccggcctctcaagctggaaaccagcagacagttgtacggaacgaagctgcgg
acaagcgtatcccggatggagcgctttgttgcctgcccgttctcccattttgcctcccat
gggttgaagttgagagagcggcagctgtacaggcttcaggctcccgacatcggacagctg
ttccatgctgccttgagcagcatggccgtcaagttccaatcgcagcatcgaagctgggga
gacctgaccgctgaggaatgcctgcgcgaagcggaagcgaccgtggatcggctcgcaccg
atgctgcagggtgaaatcctgctcagctccaagcggtacggctatatttcgcgaaagctt
aaaaacatcgtgggccgagcgtcggtcatattgggagagcaggcgaggcgcggcaaattc
gagccgatcggccttgagcttgatttcggtcccggaaagccgctgcctcccctggcgttt
gaattgccgaacgggaccaagatggagattgtcgggcgcatagaccgggtcgacatggcc
cgaggcgagcatggcatcatgcttcgggtcatcgattataaatcgagccagaaggatctg
cgactgcatgaggtctattacggcctatccctgcagatgctgacctatctggacgtgctg
ctgacgtttgcggaggaatggctgggcgagcaggccctgcctgcgggaaccttgtacttc
cacgtgcatgatccggtattgcagtccgccaacggcatgacgccggagcaggcggcagag
gagctgctcaagcgctacaaaatgaaaggtctgctcctggcagaccgcgaagcggtgtcc
ctcatggattcgttccttgaaaaagggcactctgccatcctgcccgtcgccgtcaaaacg
gacggcagcttctacagcagcgcggccgtggcaacgcctgaccagtgggagaccctgttg
tccaccgtgcgggagaacatgctgaacatcggctcccgcatcacaggcggcgatgtcgcg
attaaaccgtatcggatacagcaggagaccgcctgcacgttctgttctttccggcccgta
tgtcagttcgacgacgcgattgagggcagcgaatacaagctgctgggcaaaccgggcaaa
gatcaggtgtgggatatgcttggacatccgaagggaggagagagccggtga
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integrated database retrieval system
