Paenibacillus sp. Y412MC10: GYMC10_1751
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Entry
GYMC10_1751 CDS
T01100
Name
(GenBank) recombination helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
gym
Paenibacillus sp. Y412MC10
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_1751
Enzymes [BR:
gym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYMC10_1751
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GYMC10_1751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ACX64034
LinkDB
All DBs
Position
2065724..2069845
Genome browser
AA seq
1373 aa
AA seq
DB search
MREMIAKPEGSMWSDDQWKAIALSGDDMLVAAAAGSGKTAVLVERIIRKILDDAAGFSVD
RLLVATFTKAAAAEMRGRIREALDRELDRDPDNEHIRRQLALLGRASITTLHSFCMEVIR
RYYQLIPLDPGFRILNEHEADLMRQDMLEELFEEKYGEVEGDPESRFLRLADWFSGERTD
DALYRLVQRLYDFSRSHSWPSHWLRETAAGFQVADTEALGNTPWVQSILADARLALNGAA
GLLQQAKAIAMQPGGPTPYADNLDEDLRLVASLLEAIDTSPWESLYGIFREASFGKLKSV
RKDEVLPELQEQVKELRDNVKKIVNELKNALFGRPASEFLRELHTAAPLMMELAETVIAF
GERYREAKAAKGMVDFNDLEHYCLHILRHPDSVPGHMMPSDAAMEYREQFDEVLLDEYQD
TNSVQEDIVRLISREMPGNRFMVGDVKQSIYRFRLAEPGLFLDKYKTFSSGTGTSQTGIR
IDLARNFRSRMEVVDAVNLLFRQIMNESVAEIAYDERAELVCGASFPEQETNGGANPYMP
EMLLIDRAGKGPEEQSDESASEEDGVQLEAEALEMETAQLEARAIARKIREMTGESGKPL
MVYDKGLKTMRPAGYGDMVILLRSAMVWAPLIIEELRLEGIPAFGEQNKGYFQATEVEII
LSLLQVIDNPRQDIPLASVLRSPILGLSEEEMAQVRLCAKGTYYDALKAAVSLSVAPPVM
DPARPMGFVDGKWTPGAGLEGLAEAAAGHELVAGSHLSDAPLTAEGHAIEISAELGAKLG
LFMDRLQRWRQEARQGSLSDLIWGIYSETGYLDWVGGLPGGRQRQGNLTALYDRAVQYEQ
DTASRGLFRFLTFISRLRERGGDLGTAGGTESQGNAVRLMTIHKSKGLEFPVVFVAGLSK
NFNQQDLNAPFLMHKELGFGPKFVDEGMRVSYPTLPNLAIRRRSQLELLAEEMRVLYVAL
TRPKEKMILVGTVKDLPKKVSAWAQADFNPELLLPDYVLARGRSYLDWIGPAVIRHPSAS
PLRGQAGLPEETSSRALAADRSQWIFSIETPESLAQGMTGMSDDVQADSENRMMKLNALR
SLEPVPESAIAEAEEEGTDVQRASIDQRLSWSYRYEAVSQISAKTSVTEMKKLLALQDSP
SLDLLEERAVKRQSRESIDASTSFTLSLRRPKFMESTKLTPAERGTVYHTIMQHLPLQRL
EDAAEPTAEIEETIRYLVEKEIITGEQASAVEAAEISSLFDCDLGKRVLSAEDVWREMPF
SYALPAAEAYQGLAFLDPISEHSAQGLPEMELLRDETVLIQGVVDCMFRHNGRLVLLDYK
TDRVLEHRGGLTALADQYRFQLDLYAKALEDILGEPVHEKWLYFFDGGHAVQV
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
gtgagagagatgatagcaaaacccgagggaagcatgtggagcgacgaccagtggaaagcc
attgcgctgtcgggcgacgatatgctggttgcagctgcggcaggttcagggaaaaccgcc
gtgctggttgaacggatcattcgcaaaatcctggacgatgccgccgggttcagcgtagat
cggctgcttgtggctacctttacgaaagccgccgctgccgaaatgcggggacggatccgg
gaagcgctggaccgtgagctggaccgggatccggataatgagcatatccggcgtcagctc
gctttgcttggcagagcgtcgattacaacgctgcactccttctgcatggaagtcattcgg
cgatattatcagttaataccgctggatccgggattccgcatcctgaacgaacatgaggcg
gatttaatgcggcaggatatgctggaggagctgttcgaagagaaatacggtgaggtggag
ggggacccggaaagccggtttctgcgcttggcggactggttcagcggcgagcgaacggac
gatgcgctgtaccgtctcgtgcagcgtctatacgatttctcccgcagccattcatggccg
tcacactggcttagggagacagccgccggctttcaggtggccgatacggaagccctcggt
aacacgccatgggtccagagcatcttggctgatgcacgcctggctctgaacggagcggca
gggctgctgcagcaagccaaggccattgccatgcagccgggagggccaacaccgtatgcg
gacaatctcgatgaggacttgcgactggtggcttccctgctggaggccatcgatacttcg
ccgtgggaatcgttgtacggcattttccgcgaggcgtctttcggcaagctcaaatccgtt
cggaaggatgaggtgctgccggagctgcaggagcaggtcaaggaactgcgcgacaacgtg
aagaaaatcgtaaatgagctgaaaaatgcattgttcggccgtccggcatcggagtttttg
cgggagcttcatacggcagcgccgctgatgatggagctggccgagacggtgatcgcgttt
ggcgagcgttacagggaagccaaggcggccaaaggcatggtcgactttaatgaccttgag
cattactgcctccatatacttcgccatcccgattccgtgccgggacatatgatgccttcc
gatgcggcgatggaataccgcgagcagtttgatgaagtgctgctggatgaatatcaagat
acgaacagcgtgcaggaagacatcgtacgattgatttctcgggagatgccgggcaaccgg
tttatggtcggcgacgtgaagcagagtatttatcggttccgtctggcggaaccgggactg
tttctcgataagtacaagacgttttcttccgggacaggcacgtcccaaacaggcatccga
attgatctggcccgtaatttccgcagccggatggaagtggtggacgccgtcaatttgctg
ttccggcagatcatgaacgaatcggtagccgagattgcctatgatgaacgggccgagctt
gtatgcggagcttcttttccggaacaggaaacgaacggaggcgcgaatccctacatgccc
gaaatgctgctgatcgaccgtgccggaaaaggtccggaggagcagtccgatgaatcggct
tccgaagaggacggggttcagcttgaagctgaggcgctcgaaatggaaaccgcccagctg
gaagcccgcgccatcgcccgcaaaatccgcgaaatgacaggcgaaagcggaaagccgctc
atggtttacgataaagggttgaaaacgatgcggcccgccgggtacggagacatggtcatt
ttgctgcgctcagccatggtttgggcaccgttaattattgaggagttaaggctggaggga
ataccggcattcggcgagcagaacaagggatactttcaggctacggaagtggaaatcatc
ttatcgctgctgcaggtgatcgataatccgcggcaggacattcctttggcttcggtattg
cgctcgcccattcttggattatccgaggaagagatggcacaggttcgcctgtgcgcgaaa
gggacttattacgatgcgctgaaggcagcggtctcgttaagcgtcgcgccgccggtcatg
gatccggcacgccctatgggcttcgtcgacggaaaatggacgccgggcgcaggactggaa
ggcctggccgaagccgccgccggtcatgagctcgtagcaggcagccatctttcggatgcc
ccgctaacggcggagggccatgctatcgaaatatcggcggagcttggcgccaaacttgga
ttgtttatggatcggctgcagcgctggcggcaggaagcgcgtcagggaagcctgagcgat
ctgatctgggggatttacagcgaaaccggatatttggattgggttggcggcttgcccggc
ggcaggcagcgtcagggcaatctgaccgccctatatgaccgggccgtgcagtatgaacag
gacacagcctccagagggctcttccgttttctgacctttatctcgcgtctccgcgagcgc
ggcggggatcttggcacggccggaggcacggaaagccagggcaacgcggtgcgcctgatg
accattcacaagagcaagggcctggagtttccggtcgtgttcgtggcgggattgtccaaa
aatttcaaccaacaggatttgaacgcccccttcctgatgcataaggagcttggcttcgga
ccgaagttcgtggatgaaggcatgcgcgtaagctacccgacgctgccaaacctggcgatt
cggcgcagatcgcagctggagctgctggccgaggagatgcgggtgctctacgttgcgctt
acacggccgaaagagaagatgatcctggtcggcacggtgaaggatttgccgaaaaaggtg
tccgcttgggcacaggccgattttaacccggagttgcttctgccggattacgtccttgcc
cggggacggagctacctggattggatcggtccggccgtgatacggcatccgtctgcgagt
ccgctccgcggacaggcgggattgccggaagagacgagctcgcgcgcgttagcggcagac
cgatcgcaatggatattctcgattgaaacgccggaatccctggcacagggcatgaccggc
atgagcgatgacgttcaggcggacagcgaaaatcgaatgatgaagctgaatgccctgcgc
agcctcgagcctgttccggaatctgcgattgccgaagcggaagaggaggggacggatgtt
cagcgggcttccatcgatcagcggttgtcgtggagttatcgttatgaagcggtcagtcaa
atatcggccaaaacgtccgtaacggagatgaaaaagctgcttgccctgcaggacagcccc
tccttggatttattggaggaacgggccgtgaaacgccagagcagggaaagtatcgacgca
agcacctccttcacgctgagcctgcggcggccgaaatttatggagtccacgaagctgacg
cccgccgagcggggaaccgtctatcataccatcatgcagcatctgccgcttcaacggctg
gaagacgctgcagaaccgacagcggagatcgaagaaaccatccgttacctggtggaaaag
gagatcatcaccggtgagcaggcttccgcggtggaagcagccgagattagcagccttttt
gattgcgaccttggaaagcgggtgctgtcagcagaggatgtctggcgcgagatgccgttt
tcctatgcgctcccagcggcagaagcttatcaggggctggcttttctggacccgatttcg
gaacattcggcccaaggattgcctgagatggagctgctgcgggacgaaacggtgctgatt
caaggggttgtggactgcatgttcaggcataacggccgccttgtgctgcttgattataag
accgaccgggtgctggagcatcgcggcggcctgacggccttggctgaccagtatcgtttt
cagctggacctgtatgcaaaggctttggaggatattttaggcgaacctgtgcatgagaaa
tggctgtacttttttgatgggggacatgccgtacaggtataa
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