Paenibacillus sp. Y412MC10: GYMC10_1753
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Entry
GYMC10_1753 CDS
T01100
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gym
Paenibacillus sp. Y412MC10
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_1753
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYMC10_1753
Archaeal homologous recombinant proteins
GYMC10_1753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
HIP1_clath_bdg
ABC_tran
MMR_HSR1
DUF87
Motif
Other DBs
NCBI-ProteinID:
ACX64036
UniProt:
D3E509
LinkDB
All DBs
Position
2071086..2074529
Genome browser
AA seq
1147 aa
AA seq
DB search
MKPILLKLSGLQSYRSTQEIDFETLCETGLFGIFGPTGSGKSTLLDAITLAMYGKVERAV
NGTQGIMNHSEDGLSVSFTFELSSAAGLERYRVERRFKRVNELSISNTVSRFIRVTPEGD
QVVADKLAEVTRCVEEKIGLKMDDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFHLERY
GDQLAIKLSRRVKDTEGSLKSVEAEQQGLGSAGKEALAEATAVLEHAKKHAALSRNQLQA
AMEAHEAMGKIRELDMEKRRLQGKLDELAQHEEEMQRLERRLELTGAAAAVLPALEAWRE
SGKAWDQRRRTAEGLLAQAASAQQAAEQAVKADEAAQAALRAEEPKLVLREQQLEQAVLL
QRERDALREELAKLDAQRTKARQEREGVTALLHKEQELLERGRRRQEELQGKLKGLETRS
GERQALHLAMQKVQALEAVRRQKHKSELELKSQEGKLKELEARLGTMQKQEQELQRDYIQ
LSMQADGLQRDAAEASAFADRIAAAAVEVSQAMSRSLRDRQLHALSLSLAAELRPGEPCP
VCGSQHHPQPAVSAGQPEETLDEGMDRLTRITHQIQEARLTLRGQHNEAESLASQSRSQI
GTFAEGELIDAISFRQSGSMEAAVTAMPVAEGPYDAEKLASDTAWLIEAADAQAAAIGQC
RAEVSKVQQSLLACRQELMKQSAALENGQAAEHQMRDQLAGLETEAADILASWQENKPEF
PLEEAAARFQLMQEKDAESESIKEGLERSVPFIEEKKEAVLRLEQQLLELEKLQIQWDAQ
REGKADGLKDKEERLQAWIGDRSAEEMLGECRSRMKLLKESAEQARSECRKAEEAARHAA
KEAALAEQAEIAAQEQHVAAKLAWENQLAASPFATEHAVMEACLTPEESERCAQLVKAHR
DGQREWTLRLRDVELKLGTRPFQEEDWERCTAELQAARATDEEALQARARAERDLEDLNQ
RHVRFMELEERRLNLQRESERLSKLQSCLRGNAFVEYIAEEQLMQVSQSASQRLRYLTKQ
RYSLEVDSGGGFVIRDDANGGVRRPVSTLSGGETFLTSLALALALSAQIQLRGQYPLQFF
FLDEGFGTLDPELLETVITALERLHTDKLTVGIISHVPELRARLPRKLVVQPAEQAGAGS
RIAIESM
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattttgttgaagttatccggactgcagagctaccgaagcacgcaggagatt
gatttcgaaacgttgtgcgaaaccgggctcttcggtattttcggaccgacgggcagcggg
aaatccacgctgctggatgcgattaccttagccatgtacggaaaagtggagcgcgcggtt
aacggaacccagggcatcatgaaccactcggaggacggtctgtccgtctcctttacgttt
gagttgtcttccgcggctgggctggagcgataccgggtagagcgcaggttcaaacgggta
aacgagctttccatcagcaatacggtgagccgtttcattcgcgttacccccgaaggggat
caggtggtggcggataaattggccgaggtcacccgctgcgtcgaagagaaaatcgggctc
aaaatggacgattttacccgtgcggtcgtgcttccacagggaaagttcgccgaattcctt
tccctgaaggggagcgaacgccggcagatgctgcagcggttgttccatttggaacggtac
ggggatcagcttgcgatcaagctcagccgccgtgttaaggatacggagggttctctgaaa
tcggtcgaagcggaacagcagggtcttggaagtgcaggcaaggaagctttggcggaagca
actgcggtgctggaacatgccaagaaacacgcggcgttatcccgcaatcaactccaagcc
gccatggaagcccatgaagctatgggaaaaattcgcgagctggatatggaaaagcggcgg
ctgcaggggaagctggacgagcttgcccagcatgaggaagagatgcagcggttggaacgc
cgccttgagctgacaggggctgcggccgccgttctccccgcgcttgaggcatggcgcgaa
tccggcaaggcatgggatcagcggcggcggactgccgaagggctcctggcgcaagccgcg
tccgcccagcaggcagccgagcaggcggtgaaggcggatgaagccgcccaagctgcgctt
cgggccgaggaaccgaagctggtgcttcgggagcagcagctggagcaggccgttttattg
cagcgggaacgtgatgcattacgggaagaactggccaagctggatgcgcagcgaacgaaa
gcgcgccaagagcgcgaaggggtaaccgctctgctgcataaggagcaggagctgctcgaa
cgaggccgcaggcggcaggaggagctgcagggcaagctgaaagggctggagacccgctca
ggggagcgccaggcgcttcatttggcgatgcagaaggttcaagcgcttgaggctgtccga
aggcagaagcacaagtccgagctcgaactgaaatcgcaggagggcaagctgaaggagctc
gaggccagattgggtaccatgcagaagcaggagcaggagctgcagcgcgattacatacag
ctctccatgcaggctgacggcttgcagcgtgacgcagccgaagcatcggcatttgccgat
cggatcgccgccgccgcagtcgaggtaagccaggcgatgagccgatcgcttcgggacaga
cagcttcatgcgctgtccctttcgctggccgccgagctccggccaggcgagccttgtccc
gtgtgcggaagtcagcatcatccgcaaccggccgtttcggcaggacagcctgaagagact
ttggatgagggcatggaccggctgacgcggatcacgcatcaaatccaggaagccagactg
actctgcgggggcagcataacgaagcggagtcgctggcgagtcaatcgcgttcgcagatc
ggcactttcgcagaaggcgaattgattgacgcgatttccttcaggcagagcggatcgatg
gaagccgcggtaaccgccatgcctgtcgctgaagggccgtacgacgcggaaaagcttgct
tcggatacagcctggctcatagaagcggctgatgctcaagctgctgccatcggacaatgc
cgagcggaagtttccaaggtgcagcagagtctcctggcatgtcggcaggagctgatgaaa
cagagcgccgcgctggagaatgggcaagcggcagagcaccagatgcgggatcagttagcc
gggttggaaaccgaagctgcggacattttggcttcctggcaggaaaacaagccggaattt
cctttggaagaggcagctgcccgttttcagctcatgcaagagaaggacgcggaatccgaa
tcgattaaggaagggcttgagcgcagcgttccattcatcgaagagaaaaaggaggccgtc
ctccgcttggagcagcagctgcttgagctcgaaaagctgcagattcaatgggatgcgcag
cgggaaggaaaggcggatggcctgaaggataaagaagagcggcttcaggcttggatcgga
gaccggtcggctgaggaaatgctgggcgagtgcaggtccaggatgaagctgcttaaggag
tccgcggaacaagccaggagcgaatgcaggaaggcagaggaggcggctcggcatgcagcc
aaggaagcggcgcttgcggaacaggcggaaatagccgcgcaggagcagcacgtggctgcc
aagcttgcctgggagaaccagctggccgcctctccgttcgctacggagcatgccgtcatg
gaagcctgcttgaccccggaagaaagcgaacgatgtgcccagctcgtgaaagcgcatcgg
gacgggcagcgggaatggaccctgaggcttcgcgacgtcgagctgaagcttggcacccgc
ccgttccaagaagaggactgggaacggtgcacagccgagcttcaggcggcccgtgcaacc
gacgaggaagcgctgcaggcgagagcccgggcggagcgggatttggaagacttgaaccag
cgtcacgtccggttcatggaattggaagagcggcgcctaaacctccagcgagagagcgaa
cgcttgtccaaattgcagtcctgcttgcgcggcaacgcgtttgttgaatatattgcggaa
gaacagctgatgcaggtgagccagtcggcctcccagcgtcttcgctatttgaccaagcag
cgctactcgcttgaggtggattccggcggaggttttgtcattcgggacgatgccaacggc
ggcgtccggcgtccggtatccactttatccggcggcgagacgttcctgacctcattggcc
ttggctttggcgctctccgcccaaatccagctgcgcgggcaatatccgctgcaattcttt
ttcctcgacgaaggattcggcacgctggatccggagctgctggagacggtcatcaccgcg
cttgagcgcctccataccgataagctaaccgtcggcatcatcagccatgtgcccgagctt
cgggcacgcctgccgcgcaagctggtggtacagccggcggaacaggcgggagcgggatcc
cggattgcaatcgaatcgatgtag
DBGET
integrated database retrieval system
