Paenibacillus sp. Y412MC10: GYMC10_1863
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Entry
GYMC10_1863 CDS
T01100
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYMC10_1863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_1863
Enzymes [BR:
gym01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GYMC10_1863
DNA repair and recombination proteins [BR:
gym03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYMC10_1863
Prokaryotic type
GYMC10_1863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACX64146
UniProt:
D3E5J6
LinkDB
All DBs
Position
2187744..2188436
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AA seq
230 aa
AA seq
DB search
MRMFNNDWDLILQGEVDKPYFQALMERVDEEYRRSTVYPPKEDIFRALQQTSYQSTKVVI
LGQDPYHGRRQAQGLSFSVSPGVAIPPSLRNIHKELSSDLGISAPNHGSLQSWADQGVLL
LNAVLTVREGEPNSHKGIGWETFTDKVIAKLNERERPMVFILWGSYAQKKGSFIDRSRHK
VLESSHPSPFAAHKGFFGSRPFSASNAFLMQEGMDPVNWDIPNTPDDGDE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcggatgtttaacaatgattgggaccttatcctgcagggagaagtggataagccttat
tttcaagctttgatggaacgggtggatgaagagtaccggcgcagtacggtgtatcctccc
aaggaagacatatttcgggctctgcagcaaacatcgtaccaatcgacgaaggtcgttatt
ttgggacaagacccttatcacggtcgccggcaggcgcagggactgagtttttccgtctcg
cccggggttgcgattcctccgtctttacgcaatatacataaggagctttcatcggatctg
gggatttccgctccgaatcatggatccttgcaatcatgggcggaccagggagttctgctg
ctcaatgccgtgctgacggttcgcgagggcgagccgaactcgcataaaggcatcgggtgg
gagaccttcaccgataaggtcatcgcgaaactgaacgaacgtgaaaggcccatggtgttc
atattatggggcagttatgcacagaagaaaggttccttcatagaccgaagccgtcacaag
gtgcttgagtccagtcatccgagcccgtttgcagcgcacaaaggattcttcggcagccgt
ccattttcagcatcgaatgcttttttaatgcaagagggtatggatccggtgaattgggac
atcccgaacacgccggacgatggagatgaataa
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