Paenibacillus sp. Y412MC10: GYMC10_1933
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Entry
GYMC10_1933 CDS
T01100
Name
(GenBank) type III restriction protein res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym03022
Basal transcription factors
gym03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GYMC10_1933
09124 Replication and repair
03420 Nucleotide excision repair
GYMC10_1933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gym03021
]
GYMC10_1933
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_1933
Enzymes [BR:
gym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYMC10_1933
Transcription machinery [BR:
gym03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GYMC10_1933
DNA repair and recombination proteins [BR:
gym03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GYMC10_1933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACX64215
LinkDB
All DBs
Position
2261229..2263016
Genome browser
AA seq
595 aa
AA seq
DB search
MHNKPCIVQRDRTILLETAHADAEAAREQLAQYADLIKSPASFHTYRLTPLSLWNAAAGG
MSAEAICSSLQSLSRWDVPAALLEEVRQLVGRYGQLSLLPHPTLERALLLSSNEEALMQE
LTSHRSLREIGIRLISPKEAEVPSDRRGVLKQEMTRLGYPVLDHAGYMDGQYLNILWRGE
KSGSWRLEDSNGGSNDQRFVLRDYQQKAAESFRDIGGEGGNGVLVLPCGAGKTVIGIAAM
RELQCETLILTSNTTSVRQWIAELMQKTTLSVDEIGEYSGQRKQVRPVTVATYHILTHRQ
GKGEEQQHMKLFNERRWGLIIYDEVHLLPAPVFRATADIQATRRLGLTATLVREDGRESD
VFSLIGPKRYEMPWKRLEAQGWIASVTCTEIKVPLPDEIREACETANKREQYRLAAENPS
KLDVIRQLVDVHKDAQTLIIGQYLDQLHAISRELQAPLITGQMTQDQRNEWYNAFREGNI
RVLVVSKVANFAVDLPDASVAIEVSGSYGSRQEEAQRLGRLLRPKSGENRAYFYALVTED
SREEIFAIRRQLFLIEQGYEYHAIHAKQPAASLDLIAMRNPRSYQHPDGKEVSWR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtgcacaacaagccttgcatcgtccagcgcgatcggaccatacttcttgaaaccgcccat
gcggatgcggaggctgcgcgcgagcagctagcccaatatgcggatttgatcaaaagtccc
gcgtcttttcatacatatcgcctgacccctttatctttatggaacgccgctgcagggggc
atgtcggctgaagcgatttgctcgagccttcagtcgttgtcgcgttgggacgtgccggcc
gccctgctggaagaggttcgccagctcgttgggcgttacgggcagctgtcgctgctcccg
catccaacgcttgaacgtgcattgctgttatccagcaatgaggaagccctgatgcaggag
ctgacgtcccatcgctccctgagggaaatcggcatccggttgatttcaccgaaggaagca
gaggtgccttcggaccgccgcggcgtgttaaagcaggagatgacccggctcggctatcct
gtgctggaccacgcgggatatatggacgggcaatacctgaacattctttggcggggagaa
aaatcgggcagctggcgccttgaagattcgaacggcggatccaacgatcagcgcttcgtg
cttcgcgactatcagcagaaggctgccgaatccttcagggatattggcggcgaaggcggc
aacggagtgctggtcctgccatgcggggccgggaaaacggtcattggcatcgccgccatg
cgcgagctgcaatgcgagacgctgatcctcacttccaatactacgtcggtaaggcagtgg
atcgccgagctgatgcagaaaacgacgctgtccgtggatgaaatcggcgaatactccggt
caacgcaaacaggtcaggccggtgacggtcgctacctaccacatcttgacccaccggcag
ggcaagggggaggagcagcagcatatgaagctgtttaatgaacggcgctggggcttgatc
atttatgacgaggttcatcttcttcccgcaccggtattccgcgcgacggccgacatccag
gcgacccgcaggcttggcctgaccgccactttggttcgcgaggatggaagggagagcgac
gtgttctccctgatcggtcccaaacgatatgaaatgccgtggaaaaggctggaggcacaa
gggtggattgcttcggtgacctgcacggagattaaggtgccgctgccggacgagatcaga
gaagcctgcgaaacggcaaacaaaagggagcaatatcggctggctgccgagaatccctcc
aaacttgatgtgattcggcagctcgtggatgtccacaaggatgcgcagacgctcatcatt
ggacaatacctggatcagctccatgccatttccagggagctgcaggccccgctcatcacg
ggacaaatgacccaggatcagcgcaacgaatggtataacgccttcagggaaggaaacata
cgcgtgcttgtcgtatcgaaagtggcaaacttcgcggtcgatctccccgatgcttccgta
gcgatcgaggtttcgggcagttacggctctcggcaggaggaagcgcagcggcttggacgt
ttgctgcggccgaagtcaggggagaatcgggcttatttttatgcattggtaacggaggac
agccgggaggagatctttgcgatccggcgacagctgtttctgattgagcaggggtacgaa
tatcacgcgatacatgcaaagcagccggcggcctccctggatctgatcgcgatgcgaaat
ccccgttcttatcagcatcccgacgggaaggaggtctcgtggagatga
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