Paenibacillus sp. Y412MC10: GYMC10_1949
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Entry
GYMC10_1949 CDS
T01100
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GYMC10_1949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_1949
Enzymes [BR:
gym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYMC10_1949
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYMC10_1949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
PriA_CRR
Helicase_C_2
zinc-ribbons_6
T2SSE
PIF1
DUF5697
Flavi_DEAD
RUBY_RBDX
ADDB_N
SLFN-g3_helicase
DAP3
AAA_30
nSTAND3
TF_Zn_Ribbon
HypA
Motif
Other DBs
NCBI-ProteinID:
ACX64231
UniProt:
D3E5T1
LinkDB
All DBs
Position
2279640..2282168
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AA seq
842 aa
AA seq
DB search
MEMARVIVDVPSKDTDRPFDYLIPEELRPWVEVGSRVGVPFGHRTLQGFVVSLHPRPEMD
TAKMKPIQEVLDVMPPLSPELIELGEWMKERYACRYISALQSMLPTALKGKAERYISLGE
PDAGLSDESGGLFALLPESELEQEIIRFVSQRGEVSLQQLTRAFPDAAATVKALIGRGRL
SEFQQIKDKLQKKTMKAVELAVSSEEAHVALASFPVKAQRQKEVLQYIVEMEDFLPISQK
DLLQTLGVTAGTVKALADKGLITLEDVEVFRDPYRGRHFTPSAPLALTPEQQAVYRSIVR
KLDERKHGAFLLHGVTGSGKTEIYLQTIQRCMDQERQAIVLVPEISLTPQMVERFKARFG
DRVAVMHSRLSDGERYDEWRKIREGRASVVVGARSAVFAPFDRLGLIIMDEEHESSYKQE
ETPKYHARDVAIHRASLTGAAVILGSATPSLESYHAARSQAQDDFAPHLLEMPSRALGNQ
LPAVQVVDMREELREGNRSMFSRSLHAAISARLERGEQTVLLLNRRGYSTFVMCRSCGYV
AGCPECDISLTYHQKSNNLRCHYCGYAAQAPEVCPDCGSEHIRYFGTGTQRVEEELAKLF
PGIRVIRMDVDTTTEKGSHEKLLKQFRDKKGDVLLGTQMVAKGLDFPDVTLVGVITADSA
LNLPDFRAAEKTFQLLTQVAGRAGRHQLPGEVVIQSYTPEHYSIIHASSHDYLSFVKDEL
KHRKALHYPPYCRLILVTLSHEQLPLLVRLAENFAAAIKSESDRRGWFGSLDRFDASALD
ILGPVASPIPRLKNRYRFQCMIKWRGTMDAVSLVRSVAEKLQDSARDGKLQISIDVDPQM
LM
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggcccgtgtgattgtggacgtgccgtccaaggatacggaccgtccatttgat
tatctgattccggaggagctccggccatgggtcgaggtaggcagccgggtcggcgtgccg
ttcggtcaccgtacgcttcagggattcgtggtttcgctgcatccccggcccgagatggat
acggccaaaatgaagccgattcaggaagtcctcgatgtgatgcctccgctctcgcctgag
ctgattgagcttggagaatggatgaaagagcggtatgcatgccgttatatatccgctctt
caatcgatgctgccaacggcgctgaagggaaaagccgagcggtatatttcccttggcgag
ccggatgcaggcttgtcggatgaaagcggcggattattcgcgctcctcccggaaagcgaa
ttggagcaggagatcatccggtttgtcagtcagcgaggcgaggtgtcgctccagcagtta
acgcgagcgtttccggatgcggcagccaccgtaaaagcgctgatcggccgggggcggtta
agcgaattccagcaaatcaaggacaaactgcagaaaaaaacgatgaaagcggtagagctt
gccgtttcgagcgaggaagcgcatgtggcgctggcttcgtttccggttaaggctcagcgg
cagaaggaagtgctccaatatatcgtagagatggaggacttcctgccgatatcgcagaag
gatctgctgcagacgctcggcgtcaccgcaggcaccgtgaaggcgctggccgacaaggga
ctgattacccttgaggatgtcgaagtgttccgcgacccgtaccggggacggcactttacg
cccagcgccccgctggcgctcacgccggagcagcaggcggtgtaccggagcatcgtgcgc
aagctggatgaacgcaagcatggcgcgtttctcctgcacggggtaacgggcagcggcaag
accgagatctacctgcagaccattcagcgctgcatggatcaggagcgtcaggcgattgtc
ctggtgcccgaaatatcgctcacaccccaaatggtggagcggttcaaagcccgcttcggc
gaccgcgtggccgtcatgcacagccggctttcggatggtgagcgctacgatgaatggcgc
aaaattagggaaggccgggcttcggttgtcgtgggagcacgatcggcggtgtttgcgccg
tttgaccgacttggccttattattatggatgaagagcatgaaagttcatataagcaggaa
gaaacgccgaagtaccatgccagggacgtggcgattcaccgtgcctcgctgacaggcgca
gccgtcattctgggctcggcaacgccttcgcttgaaagctaccatgcggcgagatcgcag
gctcaggatgattttgctccgcatctgctggagatgccgagccgtgcgctgggcaaccag
ctgccggctgttcaggtcgtggatatgcgggaggagctccgggaagggaatcgctccatg
ttcagccgctccctgcatgccgcgatttcggcgcggctggaacgcggagaacagacggtg
ctgctgctgaatcggcgggggtattccactttcgtgatgtgccggagctgcggatatgtg
gctggctgtccggaatgcgacatctcgctgacctatcatcagaaatcgaataacttgcgc
tgtcactactgtggctatgccgcccaggcaccggaggtttgcccggattgcggcagcgag
catatccgctatttcggtacaggtacgcagcgtgtcgaagaagagttagccaagctcttt
cccgggattcgcgtcatacggatggatgtggacaccacgacggaaaagggctctcacgag
aagctgctgaagcagtttcgggacaaaaagggcgacgtgctgcttggaacccaaatggtc
gccaaaggcctggatttcccggatgtcaccctggtcggcgtcattacggccgattcggcg
ctgaacctgcccgacttccgggcggccgagaagacgtttcagctgctgacccaggtggcc
ggaagagcgggacgccatcagctgccgggtgaagtggtcatccaatcctacacgcccgag
cattattcgattattcatgcaagcagccatgattatttatccttcgtcaaggatgagctg
aagcaccgcaaagcgctccattatccgccgtactgcaggctgattctggtgacgctgtcg
catgaacagctgccgctgctcgtacgactggcagagaattttgccgccgccatcaaaagc
gaatccgaccgccggggatggttcggaagcctggaccggttcgacgcaagcgcgctcgat
atcctgggtccggtggcttcccccattccgcggttaaaaaatagatacagatttcaatgt
atgataaaatggcggggaacgatggatgctgtctcgctggtgcgttcggttgccgagaag
cttcaggattcggcgcgggacggcaagctccaaatcagtattgacgttgatccgcaaatg
ttaatgtaa
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