Paenibacillus sp. Y412MC10: GYMC10_2147
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Entry
GYMC10_2147 CDS
T01100
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym00300
Lysine biosynthesis
gym00470
D-Amino acid metabolism
gym01100
Metabolic pathways
gym01110
Biosynthesis of secondary metabolites
gym01120
Microbial metabolism in diverse environments
gym01230
Biosynthesis of amino acids
Module
gym_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
gym_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GYMC10_2147
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GYMC10_2147
Enzymes [BR:
gym01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GYMC10_2147
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACX64428
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Position
2490984..2492318
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AA seq
444 aa
AA seq
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MFLHGTSKINDQGHLEIGGCDTSDLKAQYGTPLYIVDEQSVRNRCREYIEAFKASGLKFQ
VAYASKAFCVMAMCRLADEEGMSLDVVSDGELYTALQAGFPADRIHFHGNNKTPEEIEMA
LDAEIGCFVVDNVIELHMLQAIAAEKNRKVNILLRVTPGVEAHTHEYISTGQTDSKFGFD
IGNGSAYEAVQLAEAQANIHLMGIHSHIGSQIFEVEGFQMAVQRVAEFAASVKEGLGVVF
KVVNLGGGFGIRYVDGDTPLQVSQYVKAITDAVKNHFAGLGSELPEIWVEPGRSIVGDAG
TTLYTVGTSKDIPGVRKYVAVDGGMTDNPRPALYESKYEALLANRAKEEPEETVSIAGKC
CESGDMLIWDLELPKVETGDLLAVSCTGAYNYSMASNYNRIRKPAVVFVKDGQSNLVVRR
ESLADIISNDVVPAGVTKETVTSL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtttttacacggtacaagcaagattaacgatcaggggcatttggaaatcggcgggtgt
gacacatccgatttgaaagctcaatatggaacaccactatatatcgtagacgagcagtcg
gttcgcaaccgctgccgggaatacatcgaggcctttaaggcttccggtttgaagttccaa
gtcgcgtatgcaagcaaggcgttctgcgttatggccatgtgccgattggccgacgaggaa
ggcatgtcgctcgacgttgtttccgacggagagctgtacacggcgcttcaagccggattc
ccggcggatcggattcatttccacggaaataataagacgccggaagagatcgagatggcg
ctggatgccgaaatcggctgtttcgttgtcgataacgtgatcgaactgcatatgctgcag
gccatcgctgccgagaagaaccgcaaggtcaacattttgcttcgcgtgacaccgggcgtc
gaggcgcatacgcatgaatatatctcgacaggacaaaccgattcgaagttcggctttgat
atcggcaacggctctgcgtacgaagcggtgcagcttgcggaagcacaggcgaatattcat
ctcatgggcatccattcccacatcggttcccagatttttgaggtggaaggcttccagatg
gctgttcagcgcgtagctgaatttgcagcttccgtaaaagaaggcctgggcgtcgtgttc
aaggtcgtgaacctgggcggcggattcggtatccgctacgtggatggagatacgccgctt
caagtatcccagtatgtaaaagcgattacggatgcggtaaagaaccattttgcgggcctt
ggttccgagcttcctgaaatttgggtggaaccgggtcggagcatcgtcggtgacgcaggt
accacgctctacacggtgggaaccagcaaggatattcccggggtgcgcaaatatgttgcc
gtcgacggcggcatgacggacaatccgcgtccggcgctctacgagtcgaaatacgaagcg
ctgcttgcaaaccgggctaaagaagagccggaagaaacggtatccattgccggcaagtgc
tgcgagagcggagacatgctgatttgggacctggagcttccgaaggttgaaacgggcgat
ctgctggcggtgtcctgcacgggcgcatacaactattccatggccagcaactacaaccgg
atccgcaaacctgcggtcgtattcgtgaaggatgggcaaagcaatctggtcgttcgccgc
gaatcgcttgccgatatcatcagcaacgatgtcgtgccggcgggtgtaacaaaagaaacc
gttacgagtttataa
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