Paenibacillus sp. Y412MC10: GYMC10_2375
Help
Entry
GYMC10_2375 CDS
T01100
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYMC10_2375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_2375
Enzymes [BR:
gym01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GYMC10_2375
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GYMC10_2375
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYMC10_2375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
HVO_2753_ZBP
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
ACX64653
UniProt:
D3E8S6
LinkDB
All DBs
Position
2714868..2715689
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEMENYRRLLSQSILNVPITDVVVNREKSLNVTIDEFTSALKGSKVIFVERRGKHL
IFHLHNGGRLLLHLMLGGILYLGRRDDEERPSRSTQVEITFGDQVLYFIGLRLGYLHFLT
ARETENALKDLGPELLDRRMTKARFVELIGKRRGALKTTLVNQQVVAGIGNCYADEIAFD
ARIHPLSKIQDLPEESLEQLYDSTVKVMHEATDGGGYMEMPFQEGDVLTGAYNDECKVYD
REGEPCVRCGTPIVKAEHASRKVFFCPNCQHEV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccggaaatggagaattaccgaagattgttatctcagagcattctgaat
gtgccgatcaccgatgtggtcgtgaaccgtgaaaaatccttgaatgtgacgattgacgag
tttacttcggccctgaagggaagcaaggtcatttttgtggagcggagaggcaaacatctc
atattccatttgcataacggaggcagactcctgctgcatctgatgctggggggcattttg
tatctgggacgcagggatgatgaggagcgcccttcccgttcgacccaggtcgagatcacg
ttcggtgaccaggtgctgtattttatcggccttcgcctgggttatctgcattttctaaca
gcgagggaaaccgagaacgccctaaaagaccttggtcctgagcttctggatcggcgaatg
accaaagcgcgtttcgtcgaactgattggaaaacggcggggcgccttaaaaacgacgttg
gtcaatcaacaagtcgtcgccggcatcggcaactgttatgcggacgagatcgcttttgat
gcccgaatccacccgctatccaaaattcaggatttgccggaggagtcactagagcagctg
tacgacagcaccgtcaaagtgatgcacgaggcgacggacggcggaggatacatggaaatg
ccctttcaggaaggggatgtgctgacaggtgcttataacgacgaatgcaaagtgtacgat
cgtgaaggagagccctgcgttcgctgcggtacgccgatcgtgaaggcggagcacgcctcg
cgcaaagttttcttttgcccgaattgccagcatgaagtctaa
DBGET
integrated database retrieval system
