Paenibacillus sp. Y412MC10: GYMC10_3050
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Entry
GYMC10_3050 CDS
T01100
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym00040
Pentose and glucuronate interconversions
gym01100
Metabolic pathways
gym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GYMC10_3050
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GYMC10_3050
Enzymes [BR:
gym01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GYMC10_3050
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cu_amine_oxidN1
Pectate_lyase_4
Big_13
Big_6
Big_3_3
GspA_SrpA_N
Wzt_C
K319L-like_PKD
Glucodextran_B
Big_7
Motif
Other DBs
NCBI-ProteinID:
ACX65315
LinkDB
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Position
complement(3526227..3528554)
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AA seq
775 aa
AA seq
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MNAEGLLMKASKKVSVLILALLLPLIVIFSTAVPAAESYEIVPLTDPVTNPDTTDEVKID
FQTKGSQTAEGYLPDNGDAYGERGNGFTYGWTPGIVGAARDYSLIEPDLKLATLNQFGQG
IIWEIAVPNGKYEVTVSIGDIRYPDQIKGKLLLLAEETVIFENKQVDGKWEHVKPIGQTY
VSKTVEADVTDGKLTLDPKDSATENIKINYIEIKSLDVPIPIDPVDPVIEEPRDIDRTPV
IIVVNGEEAESDVPPVRANGQVMVPVDMIAEEFGADVGWNEEKNAVLINSMPSQARLKQQ
STQLIVNGLEIESEVRPFVLDGNWMLPIREISEAMALDVSWDEATLTLQSSLRPHTEPAM
ELHGWASVEADGQGGTTGGGDAEPRTVTTLEELEQLAGDDEPRVIVISGTITSGAQPISV
GSNKTILGEDQYATIRGGITIDDSSNIIIRHLNFQGIWPIFGPADAIAVRNSHHLWFDHL
NIWDASDGLLDLTQGTNYVTVSWNKFFYTDPDNPHRMVSLDGGGAEHDATDTGKNKVTYH
HNWFANNTDQRMPRVLFGQAHAYNNYYTASNNNYAIGVGVFASMLVENNYFKNVKNPHQF
MYPDRRPAYITATGNIYDNTSGLMDTGAVTPEGYDSVAPFTNPPYAYELDDAEDIPFLVT
RYAGLMVNEDITAPEAPVIIAPAESAEIHMRTPSISGTAEPSSIVTITLTGTSSGSTKNA
TLTTTAESNSSFSAESTRLNNGTYTITATATDAAGNVSHASINRSIRIKGQADKK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcggagggattattgatgaaggcatcaaaaaaagtttcggttctgatactggca
ctcttacttccattgattgtgattttctctacggcagttccggctgcggaatcctacgaa
atcgtcccgctcacagatccggttacgaatccggatacaaccgatgaggtcaaaatcgac
ttccagaccaaagggtctcaaacggcagaagggtatctgcccgacaacggggatgcgtac
ggcgaacgcgggaatggctttacgtatggatggaccccaggcattgttggagccgccaga
gattacagcttaatcgaaccggatcttaaactagcaaccttgaaccaatttggccaaggg
attatttgggaaattgccgttccgaacggcaagtatgaagtgacggtcagcataggcgat
attcgatatccggaccaaatcaaaggaaaattgttgctcttggctgaagagaccgtcatc
ttcgagaacaaacaagttgacggcaaatgggaacacgtcaaaccgattggacaaacttac
gtttccaaaacggtagaagcggatgtgaccgacggcaaactgaccctcgatccgaaagat
tccgccacggaaaacattaagatcaactacattgaaatcaagtcgcttgacgttccgatt
cctattgatcccgtagaccctgtaattgaagaaccacgagacattgataggactcccgta
atcattgttgtcaatggagaagaggcggagtcggatgttccgccggttagagcgaacggc
caagtcatggtacctgtagatatgatagctgaagaatttggcgctgatgttggttggaat
gaggaaaagaatgccgttctgattaattcaatgccgagtcaagcaaggctcaaacagcag
tcgactcagctgatcgtgaacggtttggaaatcgaatcggaggttcgtccatttgttctg
gatggcaattggatgcttcctattcgggaaatatccgaagccatggccttggacgtctcc
tgggatgaggcaaccctgacgcttcaaagtagtttaaggccgcacacggaacctgccatg
gagcttcatgggtgggcctccgtggaggctgatggacagggcgggacgacaggcggcggc
gatgccgaacctcggacggtgacaacgctggaagaactggaacaactggctggagacgac
gaaccaagagtcatcgtcatttccggaacgatcacatccggggctcagcctatcagcgta
ggcagcaacaagacgatattgggggaggaccagtacgcgaccatccgcggcggcatcacc
atagacgatagcagcaacatcattattcgccacttgaacttccaaggcatctggcctatc
ttcggccctgccgacgcgatcgccgtgagaaattcgcatcatctttggttcgatcacttg
aacatctgggatgccagtgacggcttattggacctcacccaaggaactaactacgtcacc
gtttcatggaacaagttcttttacaccgatccggataatcctcaccgtatggtcagcttg
gacggcggaggcgcggaacatgatgctaccgacacaggcaagaacaaggtaacctatcat
cacaactggttcgccaacaataccgatcagcggatgccacgcgtccttttcggtcaggcg
cacgcctacaacaactactacacggccagtaacaacaattacgccatcggcgtaggcgtc
ttcgcgtcgatgctggtggaaaacaattacttcaagaacgtaaaaaatccgcaccagttt
atgtaccccgaccgtcgaccggcgtacatcacggctacgggcaatatttatgacaacaca
agcggattaatggatacgggtgccgttacaccagagggctacgacagcgtggcgcctttt
accaatccgccctacgcctacgaactggatgatgccgaggatattccttttcttgttact
cgatatgcgggtctaatggtcaacgaggacattacagcgccagaagcacctgttattata
gctccggcagagtcggcggaaatccacatgcgtactccgagcataagcggaacggcagaa
ccgagcagcatcgtgacaatcacattgacaggcacttcatcgggatcgacaaaaaacgca
acgttgacgacaacggctgaatcgaacagttcatttagtgccgaatcaacaagactgaac
aacggaacgtataccatcaccgcaacggcaaccgatgctgcaggcaatgtaagccacgct
tcgatcaatcgttcaattagaataaaaggacaggctgacaagaagtaa
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