Paenibacillus sp. Y412MC10: GYMC10_4140
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Entry
GYMC10_4140 CDS
T01100
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gym
Paenibacillus sp. Y412MC10
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gym03016
]
GYMC10_4140
Enzymes [BR:
gym01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GYMC10_4140
Transfer RNA biogenesis [BR:
gym03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GYMC10_4140
Prokaryotic type
GYMC10_4140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACX66367
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All DBs
Position
complement(4719826..4720737)
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AA seq
303 aa
AA seq
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MTQLEGILAVHKPAGWTSHDVVAKVRGMVRLKRIGHTGTLDPEVTGVLPLCLGRATRVVE
YLQELPKEYHAVLRLGYSTDTEDITGNVVETADEVRVTRDEALEALQSFRGQISQVPPMY
SAVKINGKRLYELAREGKTVERKSRTVTIHEIEMTDFDAEGEYTEISFRVLCSKGTYIRT
LCVDIGRKLGLPSVMVKLVRTISAGITEAQCLTLEQIEQFMKDETLQTRLIPVDQAIHHL
AKHTVSEEKAEAALKGQRLSSRAVEPAVDSSEPIRLYDIKENFLGIYKRQEETGAIVPVK
VFS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaattagaaggcatcttggccgttcacaaaccggccggatggacctcccacgat
gtggtagccaaagttcggggaatggttcgtttgaagcggattggacataccgggacgctg
gaccctgaagtgacgggcgtgcttccgttatgcttggggagagccacgcgggtcgtcgaa
tatctgcaggagctgcctaaagagtatcatgcggtcctccgccttggatactcgaccgat
accgaggatattaccgggaatgtggtggagactgcggatgaagtccgcgtgaccagagac
gaggcgcttgaagcgctgcaatcttttagaggccagatctctcaggttcctcctatgtac
tccgccgtcaaaatcaacggcaaacgattgtacgagcttgccagagaaggcaagacggtg
gagcgcaaaagccgtaccgtaacgattcatgaaatcgagatgacggactttgatgcggaa
ggggagtatacggaaatttctttccgtgtactgtgctccaaaggtacatacatccgcacg
ctttgtgtggatatcgggaggaagctcggcctgccgtccgtcatggttaagctggtacgt
acgatatcggcgggaatcaccgaggcgcagtgcttgacactagagcaaattgagcagttc
atgaaggatgaaacgctgcaaacccggcttattccggtggatcaggcgattcatcatcta
gcaaagcatacggtttccgaagagaaggcggaggccgcgctgaaggggcaacgtttgtcc
tccagggcggtagaaccggccgtcgacagttcggagcctatccgtttgtacgatataaag
gaaaactttctgggcatctataagcgtcaggaagagacgggcgctatcgttcccgtgaaa
gtattttcctaa
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