Paenibacillus sp. Y412MC10: GYMC10_4937
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Entry
GYMC10_4937 CDS
T01100
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym03030
DNA replication
gym03430
Mismatch repair
gym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYMC10_4937
03430 Mismatch repair
GYMC10_4937
03440 Homologous recombination
GYMC10_4937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gym03032
]
GYMC10_4937
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_4937
Enzymes [BR:
gym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYMC10_4937
DNA replication proteins [BR:
gym03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GYMC10_4937
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GYMC10_4937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
Motif
Other DBs
NCBI-ProteinID:
ACX67151
UniProt:
D3ECM7
LinkDB
All DBs
Position
complement(5594658..5598383)
Genome browser
AA seq
1241 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAARIGDLVREAAALGMKSLALTDHGVMYGAVPFYKACLAQGI
KPIIGCEAYITAGSRKERGSRKDQPIYHLILLAKNETGYRNLMKLCSIGHLEGYHYRPRI
DMEALAAHHEGIICLSACLGGEVPQHLLHGREAEAKAAALRYQAIFGEDYYLELQDHGMP
EQKRVNPQLIQLSRETGIPLVATNDVHYLTENDAEVQDVLICIGTGKTVEDEDRLQIQTN
QLYLKSGSDMERLYPHVPEAILNTAKIADQCHLELEFGKSILPEYSSLPEGKNAAEYLRD
LCLSGLRERYEETERWQDEVQRSELEQRLDYELGVIESMGFSDYFLIVWDFIAYAHRKGI
AVGPGRGSSAGSLVAYTLQITNVDPMKYKLLFERFLNPERITMPDIDIDFSDERRDEVID
YVVDKYGKEHVAQIITFGTMAARAAVRDVGRALNVPFGDVDKAAKLIPNHLGISIERAME
QSPQLKEQYETKPKVRELIDMAMKVEGMPRHASTHAAGIVISREPLTDAVPLQEGSEKTA
LTQYSMENLESVGLLKMDFLGLRTLSIIERTLKWIQELTGSELDFEQVPDDDQATYEMLG
RGETAGVFQLESAGIRRVLKDLKPSVFEDIVSVNALYRPGPMEFIPKFIQAKHGRIEPEY
PHPDLIPILGDTYGIIVYQEQIMQIASTMAGFSLGEADLLRRAVSKKKREVLDRERSHFV
SGSLKLGYTEDEANRVYDMIVRFANYGFPRAHAAAYGVLAFQTAYLKAHYPVPFMASMLT
AVMGSHRKVAEYVLEARRIDIEVMPPDVNESGTYFTPVMSRTAAEGSDKQADSPAGGGIR
FGLAAIKNVGTQAVENIVEIRREKPFESLLDFCRRVDLRVCNKRVIESLIQAGAFDSLQG
HRSQLVAMLDETVEAAVKWRKERDDLQIQLFDFVETANWDIEYPDIPPYTASQQLEFERE
LLGMYLSGHPLDGFEETLTESGADRLMDLHEAEDESMATVAGMVVSLKTITTKQGKSMAF
MECEDQIERCEVVLFPEVWKRSAHLIEKGALLAIRAKVQLQDEGFKLLAEEIAPLEAQTL
GQLVRRSKVRGTQGGRGRAEGAGRGAASGATGKQAASGGEPKAVLNSAQPLAATKGQDLP
PLGKEVSGINRTSGKESRAGASNPKAEQRVFVKITADAERSEMLVKLKELLQRHPGPVAT
VLFYERSQKVLALSDAYRIKPSQELIAEMESMLGKDTVKVK
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgagctctttcgtgcatttgcacgtgcatagtgaatacagtttgctcgatggagcggca
cgtatcggtgacctggtgcgggaagcggcggcgcttggcatgaaatcgctggcgctgacg
gatcatggcgtgatgtatggtgccgttccgttctataaagcctgcctggcgcagggcatc
aaaccgattatcggttgcgaggcctatatcacggcaggctcccgcaaggagcggggaagc
cgcaaggaccagccgatctatcatttgattttgcttgccaagaatgagaccggctatcgc
aatttaatgaagctgtgctcgatcgggcatttggaggggtatcattacagaccccgaatc
gatatggaggcgctggccgcccatcatgaaggcatcatatgcctcagcgcctgcttggga
ggcgaggttccccagcatctgcttcatggacgcgaggcggaagccaaggcggctgcgctc
cgttaccaggcgatttttggagaggattattacctggagctgcaggatcacggcatgccg
gagcagaagcgcgtgaacccccagctgattcagctgagccgcgagaccggcattccgctg
gtagcgaccaacgatgtgcattatctgaccgagaacgatgccgaggttcaggacgtcctg
atctgcatcggcacgggaaagacggtcgaagatgaagacaggctgcagattcagacgaac
cagctctatctgaagagcggcagcgacatggagcgtctgtatccccatgtgcctgaagct
atattgaatacggctaagattgcggaccagtgccatttggagctggagttcggcaaatcc
attttgccggaatacagctcgcttccggaagggaagaatgctgcggaatacctgcgggat
ctctgcctgagcggattgcgggaacgctacgaagaaacggaacggtggcaagatgaagtg
caacgcagcgagctggagcagcgccttgattatgagctcggcgttatcgagagcatgggc
ttcagcgattatttcctgatcgtatgggatttcatcgcctatgcccaccggaaaggcatc
gcggtcggacccggaaggggttcctcggcaggaagcctagtggcttataccctgcaaatt
accaatgtggatccgatgaaatataagctgttgtttgagcgcttcctgaatccggaacgg
atcacgatgccggatatcgatatcgatttcagcgatgagcgccgggacgaggtcatcgat
tacgtggtggacaaatacgggaaagagcatgtggcccagatcattacgttcggtacgatg
gccgcaagggcagccgtccgcgacgtcgggcgtgcgctgaatgtgccgttcggggatgtg
gacaaggcggcaaagctgatccctaaccacctgggcatcagcattgaaagagcgatggag
caaagcccgcagctgaaggagcagtacgaaacaaagccgaaggtacgcgagctgatcgac
atggcgatgaaggtcgagggcatgccgcgccatgcatcgacgcatgcggccggcatcgtc
atttccagggagcccttgacggatgcggtgccgctgcaggaaggcagcgagaagacggcg
ctgacgcagtattccatggagaatttggagagcgtggggctcctcaagatggattttttg
ggcctgcggacgctgtcgatcatcgagcgtacgctgaaatggattcaagaattgaccggc
agtgagcttgatttcgaacaagtgccggatgacgaccaagcgacttacgaaatgttgggc
cgaggggagaccgcgggcgtatttcagctcgaatccgccgggatacggcgggtgctgaag
gatctgaaaccttcggtgtttgaggatatcgtatcggtgaatgccctgtaccgcccgggt
cccatggaatttattccgaagttcattcaggccaagcacggccggatcgagccggagtac
ccccatccggacctgatcccgattctgggggatacgtacggcattatcgtttaccaggag
cagattatgcagatcgcttcgacaatggcgggcttctcgctcggggaagcggatctgctg
cgcagagcggtatcgaagaagaaacgcgaggtgctggaccgcgagcgcagccacttcgtt
tcagggagcctgaagctgggctataccgaggatgaggccaaccgcgtgtacgacatgatc
gtccggtttgccaactacggattcccgcgcgcgcatgctgccgcttacggcgtgctggcc
ttccagacggcttatcttaaggcgcactatccggttccgttcatggcttccatgctgaca
gccgtcatgggcagccatcggaaggtagccgaatacgtgctggaggcgcggcgcatcgat
atcgaggtcatgccgccggacgtcaacgaaagcgggacgtattttacgccggtcatgagc
cgtactgctgccgagggcagcgataaacaggccgattctccggccggcggcgggatccga
ttcgggcttgccgccatcaagaacgtcggaacgcaagcggtggagaatatcgtcgagatc
cggcgcgaaaagccgtttgaaagcctgcttgatttctgccgccgcgtcgacctccgcgta
tgcaacaagcgtgtgatcgagtccctgatccaggcgggcgccttcgattccttgcagggg
caccgctcccagctggtcgccatgctggacgaaacggtggaagcggccgtgaagtggaga
aaggagcgggatgatcttcagattcagctcttcgacttcgtggaaaccgcgaattgggac
attgaatatccggacatcccgccttataccgcaagtcagcagctcgaattcgaacgcgag
ctgctgggcatgtatttgtccggtcatccgctggacggctttgaagagacgctgacggag
tccggagcggatcggctcatggatctgcatgaagcggaggatgagtcgatggctacggtt
gccggcatggtggtctcgctgaagaccataacgacgaaacaggggaaatcgatggccttc
atggagtgcgaggatcaaatcgagcgctgcgaggtcgttctctttccggaagtgtggaag
cgcagcgcgcatctgattgaaaaaggcgccctgctcgcgatccgggcgaaggtccagctg
caggacgaaggcttcaagctgctggccgaagaaattgctccgcttgaagcgcagaccctg
ggccagctcgttcggcggagcaaggtccggggaacgcagggcggcagaggcagggccgag
ggagcaggccggggcgccgcgtcgggcgcaaccggcaagcaggcggcttcgggcggcgaa
ccaaaggccgttctgaattcagcgcagccgcttgccgccacgaaaggccaagacctgcct
ccgctcggaaaggaagtttcgggcattaaccgaacgtccgggaaggaatctcgagcaggc
gcatcgaatcctaaagcagagcagcgcgtgtttgtgaaaataacggccgatgcggagcga
tcggagatgctggtcaagctgaaagagcttctgcagcggcatcccgggcccgtggcaacg
gtgttgttttatgaacgaagccagaaggtgcttgcgctcagcgatgcctatcggatcaag
ccttcgcaagagctcattgccgaaatggagagcatgctgggcaaagacaccgttaaagtg
aagtga
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integrated database retrieval system
