Paenibacillus sp. Y412MC10: GYMC10_5224
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Entry
GYMC10_5224 CDS
T01100
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYMC10_5224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_5224
Enzymes [BR:
gym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GYMC10_5224
DNA repair and recombination proteins [BR:
gym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GYMC10_5224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACX67434
LinkDB
All DBs
Position
complement(5901168..5902289)
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AA seq
373 aa
AA seq
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MLKIGSHVSFSDKGLLTATAEATSYGSSSFMIYTGAPQNTRRKPIDSMFIEEGKAAMKES
GIEEIVVHAPYIINLGSYKPNTFELAVSFLQEEIRRTHAVGVKNIVLHPGAYTDKDAEYG
IDRIAEGLNEVLGGTDETEVKIALETMAGKGTEMGRSFEEIASIIDKVKYNDRLAICLDT
CHIHDAGYDIVNDLDGVLEQFDKLIGLDRLTVVHVNDSKNPRGAGKDRHTPIGTGWIGYE
AIQRVVHHEKLQGRPFILETPWIGKDPKTQRPMYEIEIALLRGDVEGRFGPAFTQQVEEL
GAFFAKEGIESRSFVLDTWTLLKNDAKAKKADPREPMERLYDMVMAAGLLSDLSEEQINQ
RLIAWLSGVSLTS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaattggttcccacgtgtcgttttcggacaagggattgctgactgcgacggct
gaagccacgtcatacggctcaagctcgttcatgatatataccggcgcgccgcaaaatacg
cgccgcaagccgatcgactccatgtttatcgaagaaggcaaagccgccatgaaggaaagc
gggattgaagaaatcgtggtccacgcgccgtacattatcaacctcggatcgtacaagccg
aatacgtttgagctggcggtgagctttctgcaggaggagattcgccgcacgcatgcggtc
ggcgtgaagaacatcgttctccatcccggcgcatataccgacaaggatgcggaatacggc
atcgaccgaattgcggaaggtcttaatgaagtgctaggcggtacggatgagaccgaagtg
aagattgcgcttgagacgatggccggcaaaggtactgaaatgggacgcagctttgaagaa
attgcttccattattgataaggtgaagtacaacgaccgattagccatttgcctggacacc
tgccatattcatgatgcgggatatgatatcgtgaatgatctggacggcgtgctggagcag
ttcgacaagctgatcggactcgaccgtttaacggtcgtccacgtgaacgacagcaagaac
ccgcgcggagcgggcaaagaccgtcatacgccgattggaaccggatggatcgggtatgaa
gccattcagcgagtggttcatcacgagaagctccagggcagaccgttcattctcgaaacg
ccgtggatcggtaaagatccaaaaacccagcgtccgatgtacgagatcgagattgcgctt
ctgcgcggggatgtggagggccgtttcggtccagctttcacgcagcaagtggaagagctg
ggtgctttctttgccaaggaaggcatcgagtcccgttcatttgtactggatacctggacg
ctgctgaagaatgatgccaaagccaaaaaggccgatccgcgcgaaccgatggagcgcctg
tacgatatggtcatggcggccggcctgctgtccgacctgtcggaggagcagatcaatcag
cgcctgatcgcttggttgtcgggtgtttccctgacatcctaa
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