Paenibacillus sp. Y412MC10: GYMC10_6000
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Entry
GYMC10_6000 CDS
T01100
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym03022
Basal transcription factors
gym03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GYMC10_6000
09124 Replication and repair
03420 Nucleotide excision repair
GYMC10_6000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gym03021
]
GYMC10_6000
03036 Chromosome and associated proteins [BR:
gym03036
]
GYMC10_6000
03400 DNA repair and recombination proteins [BR:
gym03400
]
GYMC10_6000
Enzymes [BR:
gym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GYMC10_6000
Transcription machinery [BR:
gym03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GYMC10_6000
Chromosome and associated proteins [BR:
gym03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GYMC10_6000
DNA repair and recombination proteins [BR:
gym03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GYMC10_6000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
IMS_C
Motif
Other DBs
NCBI-ProteinID:
ACX68205
UniProt:
D3EG55
LinkDB
All DBs
Position
complement(6736309..6738597)
Genome browser
AA seq
762 aa
AA seq
DB search
MPHTIQISVRPLVEYVFRSGSITSGFRTATSLTEGTRAHQQVQRDYGENDQKEVQLEAEI
PYEDLLFVVEGRCDGLIQEDERIMIDEIKSTSGDLGEITEHTYPVHWAQAKMYAYMYAKL
HEIPAMAVRLTYFQVPSGERKQFVQEWSFAQLESFVLEVVAAYAPYANLLREHGERRDRS
IRELKFPFPAYREGQRKLAGAVYKSIGEGRRLFAKAPTGIGKTISTLFPSVKAIGEGLLS
RIFYLTAKTITRTTAEEAMARMERQGLCMHTVTLTAKDKICFSEAEGCSQMGCAFSEGYY
DRINDAILDLLSNETLITRPVVEEYARKHTVCPFEFSLDAAYAADAVICDYNYVFDPRVS
FKRMPEDVKKRSVLLIDEAHNLVDRARGMFSAELNKSAFLELQRAYKESNPGLYNTAKRV
NNRFKVLRKVSEEEERIVGSQQPEMMVELLEDFSLQAEAELMTGKSGDEADALLECYFAV
QGYLRISKLYDDRFVTYAEMSGSEVFLKLFCLDPSYLLQQAGKNYRSSVFFSATLMPLGY
YRDMLGAEEEDYSLSIPSPFSSEQLDVRIMPLSTRFKDRERNSEAIVRMLSALVQEKPAN
TLIFLPSYPYMQDIHEAFARMNPEARTLLQGHGMSEEEREAFLNAFQADAEDPLIGFAVM
GGIFSEGIDLKGERLSSVVVIGVGLPQLSFENDIIKDYFDRTGKRGYDYAYVYPGMNKVL
QAGGRLIRSEQDSGTLTLVDDRFLNRQYGMLLPEEWRHYRRI
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatactatccaaatatccgtcaggccgctggtggaatatgtctttcgcagcggc
agcattacctccggttttcgcacggcgacgtccctgaccgagggaacccgtgcgcatcaa
caggtacagcgcgattatggcgagaacgatcagaaggaagttcagcttgaagcggagatt
ccttacgaggatctgctgtttgtggtggaaggtcgctgcgacggcctgattcaagaggac
gagcggatcatgatcgacgagatcaagtcgacctccggcgatttgggcgagattacggag
catacgtacccggttcattgggctcaggccaaaatgtatgcctatatgtatgcgaagttg
catgaaattccggcgatggccgtgagactgacctacttccaggtcccgagcggagagcgg
aagcagttcgtgcaggaatggagcttcgctcagctggaatcctttgtgctcgaggttgtg
gcggcctacgcgccttacgccaacctgctgcgggagcatggcgagcggagggaccggagc
atccgcgaactgaagtttccttttcccgcctaccgcgagggacagcggaagctggccgga
gccgtgtataaaagcatcggggaaggacgaagattgtttgccaaagcccctacgggcatc
ggcaaaaccatatccacgctgtttccttcggtcaaagcgatcggcgagggcctgttatcc
cggattttttacctgacggccaagacgattacccgaaccaccgcggaggaagccatggcg
cgcatggagcgtcaagggctctgcatgcatacggttacgctgacggcgaaggacaagatc
tgtttcagcgaagcggaaggctgcagccagatgggctgcgcgttctcggagggctactat
gaccggattaatgacgccatactggatttgctctcgaatgaaacgttgatcacgaggccc
gtcgttgaagagtatgcccgcaagcatacggtatgcccgtttgaattctcgctggatgcc
gcgtacgccgccgatgccgtcatctgcgattacaactacgtgttcgacccgcgcgtctcc
ttcaagcggatgccggaggacgtgaagaagcgcagcgtgctgctcattgacgaggcgcac
aacctggtcgaccgggcgcgggggatgttctcggccgagctgaataagtccgcgttcctg
gagctgcaaagggcgtacaaagagagcaatcccgggctttacaacacggcgaagcgggtg
aataaccgctttaaggtgctgcgcaaggtcagcgaggaggaagagcggatcgtcgggtcc
cagcagccggagatgatggtcgagctgctggaggatttctcgctccaggcagaggccgaa
ctgatgaccggcaagagcggggatgaggccgatgcgcttttggaatgttattttgccgtg
caggggtatctgcgcatctccaagctgtatgacgaccgctttgtcacgtatgcggagatg
agcgggagcgaggtgtttctcaagctgttttgcctggacccctcttatttgctccagcag
gcgggtaaaaactaccgctctagcgtatttttctcggcaacactcatgccgctcggatat
taccgcgacatgctcggagccgaggaagaggattacagcctctcgattccctcgcccttc
tcttccgagcaattggatgttcggattatgccgttatcgacgagattcaaggatcgggag
cgcaatagcgaggccatcgttcggatgctgagtgcactggttcaggaaaaaccggcaaat
accctgatcttcctgccgtcctatccctacatgcaggatattcatgaggcgtttgccaga
atgaacccggaagcccgtaccttgctccaggggcatggaatgagcgaggaggagcgggag
gcgttcctgaatgcattccaggcggatgctgaagatccgctgatcggctttgccgtgatg
ggcggtattttctccgaaggcatcgatttgaagggagaacggctttcgagcgtcgtggtc
atcggcgtaggattgccgcagctttccttcgagaatgatatcatcaaggattattttgat
cgtaccggcaagaggggatacgattacgcctacgtgtaccccggcatgaacaaagtgctg
caggccggagggcgcttgatccgatccgagcaggacagcgggacgctgacgctcgtcgat
gaccgctttctgaatcgacagtacggaatgctgctgccggaggagtggaggcattacagg
cgcatctaa
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integrated database retrieval system
