Georgenia yuyongxinii: FE374_00650
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Entry
FE374_00650 CDS
T07730
Name
(GenBank) exodeoxyribonuclease V
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
gyu
Georgenia yuyongxinii
Pathway
gyu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FE374_00650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gyu03400
]
FE374_00650
Enzymes [BR:
gyu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FE374_00650
DNA repair and recombination proteins [BR:
gyu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FE374_00650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
PDDEXK_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDC26432
UniProt:
A0A5B8CAZ1
LinkDB
All DBs
Position
156549..160019
Genome browser
AA seq
1156 aa
AA seq
DB search
MGAAARPRGDGAAMTPRSGAPLPGARGQLLREMSSDPDVFDVCGDLPTGTTVLEASAGTG
KTFTIAALATRYVAEGMAELSELMLVTFGRAATSELRDRVRERLVSAERALRSPEARTSD
DAVVAHLARCDDTEREARRRRLTDALSQFDAATITTTHGFCQQMLHTLGVAGDVDADATF
VPDIADLVDEVVDDLYLQRYADATQPMLTPSDARAMARAAVSDYQAVLEPRDAPADTLAG
HRYAFAHDALAEVLHRKRARHLLDYDDLLVLLRDALADPVHGPAAAARVRARYQVVLVDE
FQDTDPVQWQILRTAFHGHRTLVLIGDPKQAIYAFRGGDVVTYLTARTDATTTATLGRNW
RSDAPLLDGLEAVFGGAALGDEAIVVRPVEAQHTGRRLDGGVPLRLRQVTREPFRLKGTK
NPAVGKVRELIAADVAADVVRQLTTTRLLDGGAWRPLEPGDVAVLTRRNADATLVRDALA
DAGVPAVVSALVSVFAQPAARQWLTLLGALEQPGHAGRTAALALTPFVGWDAARLAGASD
AALDELSDQVRTWARLLAERGVAALLEAVSVGGVAERLMATATGERVLTDLRHVGQSLHL
AATTDRLGVSALTDWLRRRVAEAEQDYAEERSRRLETDAAAVQVVTTHASKGLEFPVVYV
PFGWDRYESRTPPILRFHDDAGTRLLHVGGKEADHYDAARERHLAEERGEDLRLLYVALT
RAATQLVVHWAPSSNSAGGPLSRLLLGDFAAGELPPDRVTVAADDAVAAALTAVVDSAGR
TIALEQVTAQPGPARWSPPERGRSQLAVARLGRTLDHSWRRTSYTGLTAAAHADGVSSEP
ETTGIQDEADVAVTGTQNEAPPAAVDPARHLPSPMSDLPAGAAFGTLVHEILEQVDTAAA
DLNAELLTRCREAATVRVPGVDPVELAAALGQVLATPLGPLAGGATLADFPPADRLAELE
FELPLAGGDRADPRPGNATPPAAARAAATLADIAALLRRHLPAADVFAPYADHLAELGEA
RLLGYLTGSIDAVLRLRGDAGPRYLVVDYKTNRLGTFDEPLTAWDYRPQAMAEAMMRAHY
PLQLLLYLAALHRYLRWRQRGYDPQRHLGGGLYLFVRGMCGPGTPASDGTPHGVMAWRPP
AALVVELSALLEGRSA
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
gtgggagccgctgctcgcccacgaggagacggagctgccatgaccccacgcagcggcgcc
ccccttccgggcgcgagaggtcaactcctccgcgagatgtcatcggatccggacgtcttc
gacgtctgcggcgacctgcccactggcaccacggtcctcgaggccagcgcgggcaccggc
aagaccttcaccatcgcggcgctggccacccggtacgtcgccgagggcatggccgagctg
tccgagctcatgctcgtcacgttcggtcgcgccgccacgtccgagctgcgcgaccgggtg
cgtgagcgcctggtgtccgccgagcgcgcgctgcgcagcccagaggcccgcaccagcgac
gacgccgtcgtcgcccacctcgcccggtgcgacgacaccgagcgcgaggcccgccgtcgg
cgcctcaccgacgccctgtcccagttcgacgccgccaccatcaccaccacccacggcttc
tgccagcagatgctccacaccctcggggtggccggcgacgtcgacgccgacgccaccttc
gtacccgacatcgccgacctggtcgacgaggtcgtcgacgacctctacctccagcgctac
gccgacgccacccagccgatgctcacgcccagcgacgcccgcgccatggcccgggccgcc
gtcagcgactaccaggcggtcctcgagccgcgcgacgccccggccgacaccctcgccggg
caccgctacgccttcgcccacgacgccctggccgaggtgctgcaccgcaagcgcgcgcgc
cacctcctcgactacgacgacctcctcgtgctcctgcgcgacgcgctcgccgaccccgtg
cacggcccggccgccgccgcgcgggtgcgcgcccggtaccaggtggtgctcgtcgacgag
ttccaggacaccgaccctgtccagtggcagatcctgcgcacggcgttccacgggcaccgc
accctcgtcctgatcggcgaccccaagcaggcgatctacgcgttccgtgggggcgacgtc
gtcacctacctcaccgcccgcaccgacgccacgaccaccgccaccctcggccgcaactgg
cgcagcgacgccccactcctggacggcctcgaagccgtcttcggtggcgcggcgctgggc
gacgaggcgatcgtggtccgcccggtcgaggcgcagcacaccgggcgccggctcgacggc
ggcgtccccctgcgcctgcgccaggtcacccgcgagccgttccggctcaagggcaccaag
aaccccgccgtcggcaaggtccgcgagctcatcgcggccgacgtcgccgcggacgtggtc
cgccagctcaccaccacccgcctcctcgacggcggagcctggcgacccctcgagcccggc
gacgtcgcggtcctgacccgccgtaacgccgacgccaccctggtgcgcgacgcgctcgcc
gacgcgggcgtgccggccgtcgtctccgccctcgtcagcgtcttcgcccagccggccgcc
aggcagtggctcaccctgctcggggccctcgagcagcccggccacgcgggccggaccgcg
gccctggcgctgacaccgttcgtcggatgggacgccgcccggctcgccggcgcgagcgac
gccgccctcgacgagctctccgaccaggtccgcacgtgggcgcggctcctcgccgagcgg
ggcgtcgccgcgctcctcgaggccgtgagcgtcggcggggtcgccgagcggctcatggcc
acggccacgggcgagcgggtgctgaccgacctgcggcacgtcggccagtcgctgcacctg
gctgccacgaccgaccgcctcggggtgtccgcactgaccgactggctgcgtcgccgcgtc
gccgaggcggagcaggactacgccgaggagcgcagccgccggctggagaccgacgccgcc
gccgtccaggtggtaaccacccacgcgagcaagggcctggagttcccggtggtctacgtg
ccgttcgggtgggaccgctacgagtcgcgtacgccgccgatcctgcgcttccacgacgac
gccggtacccggctactgcacgtgggcggcaaggaggccgaccactacgacgccgcgcgc
gagcggcacctcgccgaggagcgcggggaggacctgcggctgctctatgtggccctgacc
cgggccgccacccagctggtggtgcactgggcgccgtcgtcgaactccgcgggcgggccc
ctcagccgtctgcttctgggcgacttcgccgcgggcgagctgccgccggaccgggtcacc
gtggcggcggacgacgccgtcgccgctgccctcaccgccgtggtcgacagtgcgggccgc
accatcgcgctggagcaggtgaccgcgcagccgggccccgcgcggtggtccccgcccgag
cggggccggtcccagctggcggtcgcccggctcggccggaccctcgaccactcctggcgg
cgcacctcctacaccggcctgaccgcggccgcgcacgccgacggggtcagcagcgagccg
gagaccaccgggatacaggacgaggccgacgtcgccgtcaccgggacacagaatgaggcg
ccgcctgccgccgtcgaccccgctcgccacctgccctccccgatgagcgacctgcccgcc
ggcgccgccttcggcaccctcgtccacgagatcctcgagcaggtcgacaccgccgcggca
gacctgaacgccgagctgctgacgcgttgccgcgaggccgcgaccgtgcgcgtgcccggc
gtcgatcccgtggagctcgccgcggcactgggtcaggtgctggccaccccgctcggcccg
ctcgccggtggtgcgacgctggcggacttcccacccgcggaccggctcgccgagctggag
ttcgagctgccgctcgccggcggggacagggcggaccctcgccctggcaatgcgacgcca
ccagccgcagcccgggcggccgccaccctcgccgacatcgccgccctgctgcgccgccac
ctgcccgccgccgacgtcttcgccccgtacgccgaccacctcgccgagctcggcgaggcc
cggctgctcggatacctcaccgggagcatcgacgccgtcctgcgcctgcggggcgacgcc
ggcccgcgctacctggtggtggactacaagaccaaccggctcggcacctttgacgagccg
ctcaccgcctgggactaccggccccaggcgatggccgaggcgatgatgcgcgcccactac
ccgctccagctcctgctctacctcgccgccctgcaccgctacctgcgctggcgccagcgc
ggctacgacccgcaacggcacctgggtggcggcctgtacctgttcgtccgcggcatgtgc
gggccgggcaccccggcatccgacggcaccccgcacggcgtcatggcgtggcgcccgccc
gccgcgctcgtcgtcgagctctccgcgttgctcgaagggaggtcggcatga
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