Georgenia yuyongxinii: FE374_00730
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Entry
FE374_00730 CDS
T07730
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gyu
Georgenia yuyongxinii
Pathway
gyu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FE374_00730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gyu03400
]
FE374_00730
Enzymes [BR:
gyu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
FE374_00730
DNA repair and recombination proteins [BR:
gyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FE374_00730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
TP0453
Motif
Other DBs
NCBI-ProteinID:
QDC23346
UniProt:
A0A5B8C5R6
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All DBs
Position
complement(174406..175233)
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AA seq
275 aa
AA seq
DB search
MTATPPVPVTATTLRIGAHVRHDDPVAAGQARGAALSQFFIGDPQGWKKPQVAFDGGPAA
LRAAAEEAGIDLYVHAPYVLNVATTNNRIRIPSRKLLQQQMDAAAEVGAKGLIIHGGHVG
SDAELEKGFDNWRKAVDQTDIKVPLLIENTAGGNHAMARHVDRIARLWDAISQAEGFDEV
GFCLDTCHAHAGGNELGSVVEQVRAITGRIDLVHLNDSRDAFDSGADRHANLGAGSIDAD
GLAGVVRAAGAPVVVETPGGAEEHAADFAWLRERL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgacgcctcctgttcccgtgaccgcgacgaccctgcgcatcggcgcccacgtg
cgccacgacgacccggtcgccgcgggccaggcccgcggcgccgcgctgagccagttcttc
atcggcgacccgcagggttggaagaagccccaggtcgcgttcgacggcggcccggccgcc
ctgcgcgcggccgccgaggaggcaggcatcgacctgtacgtgcacgccccgtatgtcctc
aacgtcgccacgacgaacaaccggatccggatccccagccgcaagctgctccagcagcag
atggatgccgccgccgaggtgggcgcgaagggcctgatcatccacggcgggcacgtcggc
tccgacgccgagctggagaagggcttcgacaactggcgcaaggccgtggaccagaccgac
atcaaggtcccgctcctcatcgagaacaccgcgggcggcaaccacgccatggcgcgccac
gtcgaccggatcgcgcggctgtgggacgcgatctcgcaggcggagggcttcgacgaggtc
gggttctgcctggacacctgccacgcacacgccggcgggaacgagctgggcagcgtcgtg
gagcaggtgcgtgccatcaccggccggatcgacctggtccacctcaacgacagccgcgac
gcgttcgactccggcgcggaccgccacgccaacctcggggccggcagcatcgacgccgac
gggctcgccggggtggtgcgtgccgcgggtgcgccggtggtggtcgagacgcccggcggg
gccgaggagcacgcggccgacttcgcctggctgcgcgagcgcctctga
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