Georgenia yuyongxinii: FE374_05065
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Entry
FE374_05065 CDS
T07730
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gyu
Georgenia yuyongxinii
Pathway
gyu03420
Nucleotide excision repair
gyu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FE374_05065
03430 Mismatch repair
FE374_05065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gyu03400
]
FE374_05065
Enzymes [BR:
gyu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FE374_05065
DNA repair and recombination proteins [BR:
gyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FE374_05065
MMR (mismatch excision repair)
Other MMR factors
FE374_05065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
QDC24082
UniProt:
A0A5B8C4P9
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All DBs
Position
1129897..1133370
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AA seq
1157 aa
AA seq
DB search
MSQTRTTTTTTTPTPAVRHTATVIAEALGQHPPTDEQRAMIEAPLEPLLVVAGAGSGKTE
TMAGRVVYLVANGLVAPEQVLGLTFTRKAAAELAQRVRLRLRRLHAVGLVTPADGEEAAA
ATAADLTASTGPDRPVTAGGTGLDVDRPHIATYNSFAGGIARDHALRVGADPDARLITEA
AAWQLVDDLVQGWVEDLPTDRSPATITNAVLALAGALNEHLLDPREARELLEDLCRDLVE
RQPEGNKKDPYAEVAKAARSVQERMALMDLVAAYAARKRDRGLMDFGDQVALAARIATDV
PAVGGQLRDQYRVVLLDEYQDTSVAQLRLLSSLFGAGHPVTAVGDPNQAIYGWRGASAAS
LATFPETFRRGDGTPAMTLALSTSWRNDRAILDAANTVAAPLRTARTDGPAVTVPVLRAR
PGAGPGEVLGGYLLGQADEAAQVAAFLAARWTPSSPETAAVLCRKRSQFPDVVQALRAAG
LPARVLGLGGLLATPEVVDLRATLQAAHDAGRGDALMRLLTNLRLGAADLHALQDWAREL
ARTAAAELTDDDARRLDPREESSLAEAVDRPPAAGWTSRRGHTMSAAGAARVRRLGGTLR
QVRAMTYLPLPELVTATEQLLGLDIEVAARAGTGGGTARTGLDAFTEVAASFAADADQPT
LGAFLAWLDAAEERERGLDAAEPAADEPDSSVVQVLTVHAAKGLEWDIVAVPGLVESHFP
GYDGRPSADGTVTDGGWLTDVRELPYPLRGDADSLPELDLLGAVTHKDVEEARKQFRAEA
GAHQVAEERRLAYVALTRARSTLLLTGSWFRTGKTPLPPSRFLTEPYSLGQVADMPVPDD
ATTASGATTAPGASTVANAAPHPPTAWEPRPADEVENPALTQEVTAQWPTDPLGARRAGL
ENAAAAVRQAAAQHEHPLLDDGEGGAADPVTARWLQDARLLLAERDVTRTGAHEVPLAGH
LSASAVVGLVANPHEFARDRRRPVPTEPTVVSRRGTRFHEWVEHFYGQGALLDIEEVPGS
GEDLTDTPLSDDELTRLQRTFAASVWAERVPLAVEVDLETPVAGTIVRCRIDAVFDGPDG
VEVVDWKTGRPPRTPSELAEREMQLALYRLAWSRATGTPLERVRAAFYYAGADATVRAGA
LSEDEIVARITAAIAAG
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccaggaccaccaccaccaccaccacgcccacccctgcggtgcgccacacg
gccaccgtgatcgccgaggctctcggccagcacccacccacggacgagcagcgcgccatg
atcgaggcgccgctcgagccgctcctcgtggtcgccggcgcgggttccggcaagaccgag
accatggccggccgggtcgtctacctggtggcgaacggcctcgtggcacccgagcaggtc
ctgggcctcacgttcacccgcaaggccgccgccgagctggcccaacgggtgcgactgcgg
ctgcgccggctgcacgccgtcggcctcgtcacccccgccgacggtgaggaggcagcggcc
gccaccgccgccgacctgacggcatcgaccggccccgatcgtccggtcaccgccgggggg
accggcctggacgtggaccgcccgcacatcgccacctacaactccttcgccggtggcatc
gcccgggaccatgccctgcgcgtcggcgccgacccggatgcccgcctgatcaccgaggcc
gccgcctggcagctggtcgacgacctcgtacagggctgggtcgaggacctgcccacggac
cgctcacccgccaccatcaccaacgcggtgctggccctggcgggcgcgctcaacgagcac
ctcctcgacccccgcgaggcccgtgagctgcttgaggacctctgccgggacctcgtcgag
cgtcagcccgagggcaacaagaaggacccgtacgccgaggttgccaaggcggcccgcagc
gtgcaggaacggatggcgctcatggacctcgtcgccgcctacgcggcacgcaagcgcgat
cgcggcctcatggacttcggcgaccaggtcgcactggccgcacgcatcgccaccgacgtg
ccggcggtcggcgggcagctgcgtgaccagtaccgcgtcgtgctgctcgacgagtatcag
gacacctccgtggcgcagctgcgcctgctctcctcgctcttcggtgccgggcacccggtc
accgccgtcggtgaccccaaccaggccatctacggctggcgcggcgcctccgcggcgtcc
ctggccaccttccccgagacgttccgccgcggcgacggcacgccggccatgaccctggcg
ctgagcacctcctggcgaaacgaccgcgcgatcctcgacgccgcgaacaccgtggccgcg
ccgctgcgcaccgcccgcaccgacgggcccgccgtgacggtgcccgtgctgcgggctcgg
cccggcgccgggcccggggaggtgctcgggggctacctgctcggacaggccgacgaggcc
gcccaggtcgccgcctttcttgccgcccgctggacgccgagctcaccggagaccgcggcg
gtcctgtgccgcaagcgctcacagttccccgacgtcgtccaggccctgcgcgcggccggc
ctgccggcccgggtcctcggcctcggcggcctgctggccaccccggaggtcgtggacctg
cgggccacgctgcaggccgcccacgacgccggccgcggcgacgccctgatgcggctgctg
accaacctccggctgggcgccgccgacctccacgccctgcaggactgggcgcgtgagctc
gcccgcaccgccgccgccgagctcaccgacgacgacgcgcggcgcctggacccgcgcgag
gagtccagcctggcggaggcggtggaccggccgcctgcggccggttggacgagtcggcgc
gggcacaccatgtccgcggccggcgccgcccgggttcgccgcctgggaggcacgctgcga
caggtccgagccatgacctacctgccgctgcccgagctggtgaccgccaccgaacagctg
ctcggcctcgacatcgaggtcgccgcacgcgcgggcaccggcggcggcacggcgcggacc
ggcctggacgccttcaccgaggtggccgccagcttcgccgccgacgccgaccagcccacc
ctcggcgcgttcctcgcctggctcgacgccgccgaggaacgcgagcggggcctggacgcc
gccgaacccgccgccgacgagccggactcctccgtggtccaggtgctcaccgtgcacgcc
gcgaagggcctggagtgggacatcgtcgccgtcccgggcctggtcgagagccacttcccg
gggtacgacggccgcccctccgccgacggcaccgtcacggacggcggatggctgaccgac
gtgcgcgagctgccctaccccctacgcggcgacgccgactccctccccgagctggacctg
ctcggtgcggtgacccacaaggacgtcgaagaggcccgcaagcagttccgcgccgaggcc
ggtgcgcaccaggtggcggaggaacggcggctcgcctacgtcgccctcacccgtgcccgc
agcacccttctgctgaccggctcatggttccgcaccggcaagacacccctgccgccgtcg
cgcttcctcaccgagccgtacagcctcggtcaggtcgccgacatgcccgtgcccgacgac
gcaaccacggcctccggcgcaaccacggcccccggcgcatccacggtcgccaacgccgca
ccccacccacccacggcgtgggaaccgcgccccgcggacgaggtcgagaaccccgccctg
acccaggaggtcaccgcgcagtggccgaccgacccactcggcgcacgtcgggccgggctc
gagaacgccgccgcggccgtccggcaggccgccgcccagcacgagcacccgctgctcgat
gacggcgagggcggtgccgctgacccggtgacggcgcggtggctgcaggacgcgcggctg
ctgctggccgagcgcgacgtcacccggacgggcgcccatgaggtcccgctcgccgggcac
ctgtccgcctccgccgtggtgggcctggtcgccaacccgcacgagttcgcccgtgaccgg
cgccggccggtgcccacggagcccacggtcgtctcccgccgcggcacccgctttcacgag
tgggtcgagcacttctacgggcagggcgcgctgctcgacatcgaggaggtgcccggcagc
ggggaggacctcaccgacacaccgctgagcgacgacgagctcacgcggctgcaacgcacc
ttcgccgcctcggtctgggccgagcgcgtcccgctcgcagtggaggtggacctcgagacc
ccggtggcggggaccatcgtgcggtgccggatcgacgccgtcttcgacggacctgatggc
gtggaagtggtcgactggaagaccggccgaccgccgcgcacgcccagcgagctggccgag
cgcgagatgcagctggcgctgtaccggctggcctggtcccgcgcgacgggtacgcccctg
gagcgtgtgcgagccgccttctactacgccggcgcggacgcgacggtccgggcgggtgcg
ctcagcgaggatgagatcgtcgcccgcatcaccgcagccatcgcagccgggtaa
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