Georgenia yuyongxinii: FE374_06210
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Entry
FE374_06210 CDS
T07730
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gyu
Georgenia yuyongxinii
Pathway
gyu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FE374_06210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gyu03400
]
FE374_06210
Enzymes [BR:
gyu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FE374_06210
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FE374_06210
DNA repair and recombination proteins [BR:
gyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FE374_06210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_8
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
QDC24271
UniProt:
A0A5B8C464
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All DBs
Position
complement(1359040..1359927)
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AA seq
295 aa
AA seq
DB search
MPEMPEVEGLVQFLREHTAGRAVAAVEVGAISALKTFSPAPTALVRRVVRDVTRHGKWLD
IATVAGAAAPEADDGELHLVFHLAKAGWLRWYDEVPKTTVKPGRSPIALRVRLDDGAGFD
LTEAGTRKRLAVHVVADPQDVPQVATLGVEPADLTLEGLRGLLAARNQQIKGLLRDQSVI
AGIGNAYSDEILHAARMSPFALTKTFDDDASARLHAAIGEVLTAAVAEAAGRPAAELKDA
KRRGMRVHGRTGLPCPVCGDTVREVSFADSALQYCPTCQTGGKPLADRRMSKLLK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgccggagatgccggaggtcgaggggctcgtccagttcctgcgcgagcacacggccggc
cgggccgtggcggccgtcgaggtcggggcgatcagcgccctgaagaccttctcccctgcg
cccacggcgctcgtgagacgcgtggtccgggacgtcacccggcacggcaagtggctcgac
atcgccaccgtcgcgggcgccgcggccccggaggcggacgacggcgagctgcacctggtc
ttccacctcgccaaggcgggctggctgcgctggtacgacgaggtgcccaagacgacggtc
aagcccggccgctcccccatcgcgctgcgcgtgcggctcgacgacggcgccggcttcgac
ctcaccgaggcgggcacccgtaaacggctggcggtgcacgtggtcgccgaccctcaggac
gtgccgcaggtggccacccttggcgtggaaccggccgacctcacgctcgaggggctgcgc
gggctgctggcggcccgcaaccagcagatcaaggggctgctgcgcgaccagtcggtcatc
gccgggatcgggaacgcctactccgacgagatcctccacgccgcgaggatgagcccgttc
gcgctcaccaagacgttcgacgacgacgcctccgcccgcctgcacgccgcgatcggcgag
gtgctcaccgccgccgtcgccgaggccgcgggtcggccggcggcggagctgaaggacgcc
aagcggcgcggcatgcgggtgcacgggcggaccggactgccctgcccggtgtgcggcgac
acggtgcgggaggtctcgttcgccgactcggcgctgcagtactgccccacctgccagacc
ggcgggaagccgctggcagaccggcggatgtcgaagctgctgaagtga
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