Georgenia yuyongxinii: FE374_15880
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Entry
FE374_15880 CDS
T07730
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
gyu
Georgenia yuyongxinii
Pathway
gyu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gyu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FE374_15880 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gyu03021
]
FE374_15880 (rpoB)
03400 DNA repair and recombination proteins [BR:
gyu03400
]
FE374_15880 (rpoB)
Enzymes [BR:
gyu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FE374_15880 (rpoB)
Transcription machinery [BR:
gyu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FE374_15880 (rpoB)
DNA repair and recombination proteins [BR:
gyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FE374_15880 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF8659
Motif
Other DBs
NCBI-ProteinID:
QDC25900
UniProt:
A0A5B8C7B3
LinkDB
All DBs
Position
complement(3502908..3506417)
Genome browser
AA seq
1169 aa
AA seq
DB search
MAASRTSSAPTADAIATRTASRRISFAKIHEPLQAPDLLGLQTESFDWLLGNDAWRSRVQ
AAAEVGDTNVPTTSGLEEIFSEISPIEDFGQSMSLSFRDHRFEPPKYTAEECKEKDFTYA
APLFVTAEFVNYTTGEIKSQTVFMGDFPLMTERGTFIINGTERVVVSQLVRSPGVYFERV
PDKTSDKDVFTTKVIPSRGAWLEFEIDKRDAVGVRIDRKRKQSVTVFLRALGMTESEIRE
EFADFPVLLETLEKDNVHTQDEALLDIYRKIRPGEPPTVEAGRTLLENYYFNAKRYDLAK
VGRYKINKKLGLTSELGESVLRIDDVTAAIKYLLALHKDVEELPGTRNGEPIEVRVETDD
IDHFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVASIKE
FFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETP
EGPNIGLIGSLATYARINPFGFVETPYRKVEGGHVTDEVVYLTADDEDRHIIAQASAPVA
EDGKFVEDRALCRLSGGEPALVPVDEIDYMDVSARQMVSVATAMIPFLEHDDANRALMGA
NMQRQAVPLLRSEAPLVGTGMERRAAVDAGDVIVATKPGVVTEVSADAIHVAADDGTNQL
YRVSKYRRSNQGNSYNQRVLVDEGARVEVGSVLADGPATDEGELALGKNLLVAFMSWEGY
NYEDAIILSQRLVADDVLTSIHIEEHEVDARETKLGAEEITRDIPNVSEDVLANLDERGI
IRIGAEVVSGDILVGKVTPKGETELTSEERLLRAIFGEKAREVRDTSLKVPHGESGIVIG
IREFSADNDDELPPGVNQMVRVYIAQRRKITEGDKLAGRHGNKGVISNILPVEDMPFLPD
GTPVDVILNPLGVPGRMNVGQVLELHLGWIAAQGWDVTEARKAAEEWTKNFDEHSVKVGP
RTPVATPVFDGLQHEELTGLLAHTTPNRDGERMVSTDGKAQLFDGRSGEPYPEPISVGYM
YILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQEL
LTIKSDDVTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMRSLCLNVEALDAEGNAIELR
DADDEVYRAAEELGIDLSRRPDASSVEEL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcctcgcgcacctcttccgcacctactgctgacgctatcgcgacccgcacggcg
tcgcgccgcatctcgttcgccaagattcatgagccgctccaggcccccgacctgctgggc
ctgcagaccgagagcttcgactggctcctcggtaacgacgcctggcgctcccgcgtccag
gccgccgccgaggtcggcgacaccaacgtcccgaccacctcgggcctggaggagatcttc
tcagagatctccccgatcgaggacttcggtcagtccatgtcgctgtccttccgcgaccac
cgcttcgagccgccgaagtacacggccgaggagtgcaaggagaaggacttcacgtacgcg
gccccgctgttcgtcaccgcggagttcgtgaactacaccaccggtgagatcaagtcgcag
accgtcttcatgggcgacttcccgctcatgaccgagcgcggcaccttcatcatcaacggc
accgagcgtgtcgtcgtctcccagctcgtgcgctctccgggcgtctacttcgagcgggtg
ccggacaagacctccgacaaggacgtcttcaccaccaaggtcatcccgagccgcggcgcg
tggctcgagttcgagatcgacaagcgcgacgccgtcggcgtgcgcatcgaccgcaagcgc
aagcagtccgtgacggtcttcctccgggcgctgggcatgaccgagtcggagatccgcgag
gagttcgcggacttcccggtgctgctggagaccctcgagaaggacaacgtccacacccag
gacgaggcgctcctcgacatctaccgcaagatccgcccgggcgagccgcccacggtcgag
gccggacgcaccctgctggagaactactacttcaacgccaagcgctacgacctcgccaag
gtcggacgttacaagatcaacaagaagctcggcctgaccagcgagctcggcgagtccgtg
ctgcgcatcgacgacgtcaccgccgcgatcaagtacctcctcgccctgcacaaggatgtc
gaggagctgcccggcacgcgtaacggcgagccgatcgaggtccgcgtcgagaccgacgac
atcgaccacttcggcaaccggcgcatccgcgccgtcggcgagctcatccagaaccaggtc
cgcacgggcctgtcccggatggagcgcgtggtgcgcgagcgcatgaccacgcaggacgtc
gaggccatcaccccgcagaccctgatcaacatccgccccgtggtggcgtcgatcaaggag
ttcttcggcacctcccagctctcgcagttcatggaccagaacaacccgctggccggcctg
acgcacaagcggcgtctttccgcgctgggcccgggtggtctgtcccgtgaccgcgccggc
atggaggtccgtgacgtccacccgtcgcactacggccgcatgtgccccatcgagaccccg
gaaggcccgaacatcggcctcatcggctcgctggccacgtacgcgcggatcaacccgttc
gggttcgtcgagaccccgtaccgcaaggtcgagggcggtcacgtcaccgacgaggtcgtc
tacctcaccgctgacgacgaggaccggcacatcatcgcccaggcctcggccccggtggcc
gaggacggcaagttcgtcgaggaccgcgccctgtgccgcctcagcggcggcgagccggcc
ctggtgccggtggacgagatcgactacatggacgtctccgcacgccagatggtctccgtc
gccaccgcgatgatcccgttcctcgagcacgacgacgccaaccgcgcgctcatgggcgcg
aacatgcagcgccaggccgtcccgctgctgcgcagcgaggccccgctggtgggcaccggc
atggagcggcgcgccgccgtcgacgccggtgacgtcatcgtcgccaccaagcccggtgtc
gtcaccgaggtctccgccgacgccatccacgtcgcggccgacgacggcaccaaccagctc
taccgcgtgtcgaagtaccgccgctcgaaccagggcaactcctacaaccagcgtgtgctg
gtcgacgagggcgcccgggtcgaggtcggctccgtgctcgccgacggccccgccaccgac
gagggcgagctcgccctgggcaagaacctcctcgtcgcgttcatgtcgtgggagggctac
aactacgaggacgccatcatcctgtcccagcgcctcgtcgccgacgacgtgctcacctcg
atccacatcgaggagcacgaggtcgacgcccgcgagaccaagctgggcgccgaggagatc
acccgggacatcccgaacgtctccgaggacgtgctggccaacctcgacgagcgcggcatc
atccgcatcggcgccgaggtggtctccggcgacatcctcgtcggcaaggtgacccccaag
ggcgagaccgagctgacctccgaggagcgcctgctgcgcgccatcttcggcgagaaggcc
cgcgaggtccgcgacacctccctgaaggtgccgcacggcgagtccggcatcgtcatcggc
atccgcgagttcagcgcggacaacgacgacgagctgcccccgggcgtgaaccagatggtg
cgcgtgtacatcgcgcagcgccgcaagatcaccgagggcgacaagctcgccggccgccat
ggcaacaagggcgtcatctccaacatcctccccgtcgaggacatgcccttcctgcccgac
ggcaccccggtcgacgtcatcctcaacccgctcggcgtgcccggccgtatgaacgtcggc
caggtcctcgagctgcacctgggctggatcgcggcgcagggctgggacgtcacggaggcc
cgcaaggccgccgaggagtggacaaagaacttcgacgagcactcggtcaaggtcggtccg
cgcacgccagtcgccaccccggtgttcgacggcctccagcacgaggagctcaccgggctg
ctcgcgcacaccacgcccaaccgcgacggtgagcgcatggtgagcaccgacggcaaggcg
cagctcttcgacggccgctccggcgagccgtacccggagccgatctccgtcggctacatg
tacatcctgaagctgcaccacctggtggacgacaagatccacgcgcgctccacgggcccg
tactcgatgatcacccagcagccgcttggtggtaaggcccagttcggtggccagcgcttc
ggcgagatggaggtgtgggccctggaggcctacggcgccgcctacgccctgcaggagctg
ctcaccatcaagtccgacgacgtcaccggccgcgtgaaggtctacgaggccatcgtcaag
ggggagaacatccccgagccgggcatcccagagtccttcaaggtgctcatcaaggagatg
cgatcgctctgcctgaacgtggaggcgctcgacgccgagggcaatgccatcgagctgcgt
gacgccgacgacgaggtgtaccgcgccgcggaggagctggggatcgacctgtcccgccgt
ccggacgcaagcagcgtcgaggaactctaa
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