KEGG   Geobacillus zalihae: IC807_00930
Entry
IC807_00930       CDS       T07057                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
gza  Geobacillus zalihae
Pathway
gza03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gza00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IC807_00930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gza03019]
    IC807_00930
Messenger RNA biogenesis [BR:gza03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IC807_00930
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF4453
Other DBs
NCBI-ProteinID: QNU18297
UniProt: A0A1V9CTC9
LinkDB
Position
complement(173983..175650)
AA seq 555 aa
MKLLTDQQVGVFALGGLGEIGKNTYGVQFQDEIIVIDAGIKFPEDELLGIDYVIPDYSYL
VKHADKVKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLALGLIRNKLEEHGLLRQAKLI
EIREDDVIRFQKTAVTFFRTTHSIPDSYGIVVKTPVGQIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEIPHFTMSERRVGESIHDIFRKVEGRIIFATFASNIHRLQQ
VTEAAVANNRKIAVFGRSMEAAIEIGQDLGYIKCPKGTFVDANEINRLPANRVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVNRTINMLYRAGAEVIHGPL
NDIHTSGHGGQEEQKLMIRLMKPKYFMPIHGEYRMQKMHAKLAIDCGVPEENCFIMDNGE
VLGISDKEARIVGKIPSGSVYIDGSGVGDIGNIVLRDRRILSEEGLVIVVVSINMKEFKI
AAGPDIISRGFVYMRESGDLISEAQVLISKHLEKVLERKTNQWSEIKNEITETLAPFLYE
RTKRRPMILPIIMEI
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaagctgttgacagatcagcaagttggcgtttttgccctcggcggactgggtgaaatt
ggaaaaaatacatacggcgtacaattccaagacgaaatcattgtcattgacgcaggcatt
aagtttccggaagatgagctgcttgggatcgactatgtcattccagactactcctattta
gtgaagcacgcggacaaagtgaaaggactgttcatcacccacgggcacgaagaccatatc
ggcggcattccgtatttgctccggcaggtgaacatcccgatttacggcggcaaattagcg
cttgggctgattcgcaataagcttgaggaacatggattgttgcgccaagcgaaactcatt
gagattcgcgaagacgatgtcatccgcttccaaaaaacggccgtcacctttttccggacg
acacacagcattccggacagctacggtattgttgtgaaaacgccagtcgggcaaatcgtt
cacactggggattttaaattcgactttacgccggtcggcgagccggccaatttgacaaaa
atggccgaaattgggaaagagggagttctttgcctgctgtcggacagcacgaacagcgag
atcccgcattttacgatgtcggagcggcgcgtcggtgaaagcattcacgacattttccgc
aaggtggaaggacgcatcattttcgccacatttgcatccaacatccaccgtctccaacag
gtgacggaagcagccgtcgccaacaaccgaaaaatcgctgtcttcggtcgaagcatggaa
gcggcgattgagatcggacaagacctcggctatatcaaatgtccgaaaggcacgttcgtc
gacgcgaacgaaatcaaccgcctgccggccaaccgggtgacgattttatgcaccggcagc
caaggggagccgatggccgccttgtcgcgcatcgccaacggcacgcaccggcaaattcaa
atcatcccgggcgacacggtcgtcttttcctcatcgccgattccgggcaacacggtgagc
gtcaaccggacaatcaacatgctgtaccgcgccggtgcagaagtcatccatggcccgctc
aacgacatccatacgtccggccacggtgggcaggaagaacaaaaattgatgatccggctg
atgaagccgaaatatttcatgccgatccacggcgaataccgcatgcaaaaaatgcacgcc
aagctcgccatcgactgcggcgtgccggaggaaaactgctttattatggacaacggcgaa
gtgcttggcatcagcgacaaagaagcgcgcatcgtcggcaagatcccgtccggctccgtc
tacatcgacggcagcggtgtcggcgacatcggcaacatcgtcttgcgcgaccgccgcatt
ttgtctgaggaagggctcgtgattgtcgtcgtcagcatcaacatgaaagagttcaaaatc
gccgccggcccggacattatttctcgcggcttcgtctatatgcgtgagtcaggtgactta
atcagcgaagcgcaagtgttgatctccaagcatctcgaaaaagtgctggaacggaaaacg
aaccaatggtcggagatcaaaaacgaaattacggaaacgctcgctccgttcttgtacgag
cggacgaaacggcggccaatgattttgccgatcatcatggaaatctaa

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