Geobacillus zalihae: IC807_01995
Help
Entry
IC807_01995 CDS
T07057
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
gza
Geobacillus zalihae
Pathway
gza03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gza00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IC807_01995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gza03019
]
IC807_01995
Messenger RNA biogenesis [BR:
gza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IC807_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Mur_ligase_C
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
QNU18495
UniProt:
A0A1V9CFN7
LinkDB
All DBs
Position
379604..381274
Genome browser
AA seq
556 aa
AA seq
DB search
MKSKIKPVEKIRIFALGGVGEIGKNMYVVELDEDIFVIDAGVMFPEDEMLGIDKVIPDIT
YLIERQHRIQAIFLTHGHEEHMGAIAYVLKQLSVPVYGTKLTLGLAEALLKEQGVSGAKL
NEVHPDAELVFDKAKVTFFRTIHSIPDSIGISLHTSQGAIVYTSDFKFDQTPYGNNRTDL
GKMAQIGEEGVLCLLSDSTNAERPGYSGSDTVVAYEIADVIGHAKGRVFVACYASNITRI
QQVLYAARQSGRKVAVIGKTLHKVMDIAVRLGYLHVPDKVTISAHDIDRYHDRELVILTT
GGHGEPMSALWRMARQANKQVNIKEGDTVIVAASVMPGYELGFAKTIDALYRAGANVIYR
DRQVHVSGHGCQEELKLMLNLMKPKYFIPVHGEYRMQKAHARLAKAVGISEERTFLIDKG
EVIEFRGGAARPGGKVPYGNILIDGLGIGDVGNIVLRDRRLLSQDGILIAVVTLNKEAKT
IAAGPEIISRGFVYMRESETLLEEAEKMVAAIIERCLESYMLEWSSLKANIREALSQFLF
EKTKRRPMILPIIMEV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatcgaaaataaagccggtagagaaaatacgcatttttgcccttgggggagtcgga
gaaatcggcaaaaacatgtatgttgtcgaattggacgaggacatttttgtcatcgacgcc
ggggtgatgtttccggaagacgaaatgctcggcatcgacaaagtgatcccggacatcaca
tatttgattgaacggcagcatcgcattcaggcaatttttctcacccacgggcacgaggag
catatgggggcgatcgcctacgtgctcaagcagctgtctgtgccggtatacggaacgaag
ctgacgctcgggttggcggaggcgctgttaaaagaacaaggggtgtcgggcgcgaagctc
aatgaagttcatccggatgcggagctcgtgtttgacaaggcgaaagtgacgtttttccgc
acgatccacagcatccccgattcgatcggcatcagtctgcatacatcgcaaggtgcgatc
gtgtacacgagcgattttaaattcgaccaaaccccgtacggcaacaaccgcaccgactta
gggaaaatggcgcaaatcggcgaagaaggggtgctgtgtcttttgtcggacagcacaaac
gccgaacgccccggctacagcggctccgatacggtagtcgcctatgagatcgctgacgtg
atcggccatgcgaaaggacgcgtgtttgttgcctgctacgcttccaacatcacccgcatc
cagcaagtgctgtacgccgcccgccaatccgggcgtaaagtggcagtcatcggcaaaacg
ctgcataaagtaatggacatcgccgtgcgccttggctatttgcacgttccagacaaggtg
acgatttctgcgcacgatatcgatcgctaccatgaccgcgagctcgtcattttgacaacc
ggcgggcatggcgagccgatgagcgcgctttggcgcatggcgcgtcaagcgaacaaacaa
gtgaacatcaaagaaggggataccgtcatcgtcgccgcatccgtcatgccgggctatgag
cttgggttcgcgaaaacgatcgacgccttgtatcgggccggcgccaacgtgatttaccgc
gaccggcaagtgcacgtatctgggcacggttgccaagaagaattaaagttgatgctcaat
ttaatgaagccaaaatactttattccggtgcatggggaatatcggatgcaaaaagcgcac
gcccggttggcgaaggcggtcggcatctcggaggagcggacgtttttaatcgacaaaggc
gaagtgatcgagttccgcggcggtgccgcccgccccggcggcaaagtgccgtacggcaac
attttaattgatggcctcggcattggcgatgtcggcaacattgtgttgcgtgaccgccgc
ttattgtcccaggacggcattttgatcgccgtcgtcacgctgaataaagaagcgaaaacg
atcgccgccggcccggaaatcatttcgcgggggttcgtctacatgcgcgagtctgagaca
ctgcttgaggaagcagagaaaatggtggcggcaatcatcgagcgctgccttgaatcgtac
atgcttgaatggtcgtcgttgaaagcgaacatccgtgaagcgttaagccagtttttattt
gaaaaaacgaagcgcagacccatgattttgcctattattatggaagtataa
DBGET
integrated database retrieval system
