Geobacillus zalihae: IC807_15470
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Entry
IC807_15470 CDS
T07057
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
gza
Geobacillus zalihae
Brite
KEGG Orthology (KO) [BR:
gza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gza03009
]
IC807_15470 (rlmD)
Enzymes [BR:
gza01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
IC807_15470 (rlmD)
Ribosome biogenesis [BR:
gza03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IC807_15470 (rlmD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Methyltransf_15
PrmA
Methyltransf_11
Methyltransf_4
Methyltransf_23
PCMT
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
QNU17736
UniProt:
A0A7H1RTZ7
LinkDB
All DBs
Position
3085745..3087133
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AA seq
462 aa
AA seq
DB search
MTDSGKQSFITDIHQLDKKGAGQAVVWQEEEGRRKKLKLTVPSTLPGEKVRVLIDWPKRR
RAHARVEEVIERHPERLDPPCPHFDRCGGCVWQHWRYEGQLRHKTEQVKALLAQHGFDPD
VVRETIGMEHPWHYRNKMEFTFSPEGLLGLHEQGNFRQVISLETCLIAGEKIVKAAMEVA
RWARDHQLPGYHKDTHEGLLRHVMVRESFATGEVMVALFATEAPEGELKEAAADLTERVT
KALPDVKSLLWLENRAWADRTQAERTHVLAGRDFIYDELCGFRYRLWFDTFFQTNPVQAA
KLVELALEMGEPKPHEKMIDLFCGVGTFSLPFAKRVKALAGIEIVETSIESAKRNAKDNG
VDNTYFLARDARRGIDDVLEQFGRPELLLLDPPRSGAGGKVMRKIGRAQPKRVVYVSCNP
ETFVADIAELAPFGYVLKTVQPVDMFPHTAHVECCALLVKSS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgacagacagcggaaaacaatcgttcattacggacattcatcagttggataaaaaagga
gcgggacaagcggtcgtttggcaggaagaagaagggaggagaaaaaagctcaaactcact
gttccgtccacgcttcctggtgaaaaggtgcgggttttgatcgattggccgaaacgccgg
agggcccatgcccgagtggaagaagtgatcgagcggcatccagagcggctcgatccgccg
tgtccgcactttgaccgctgcggcggctgtgtctggcagcactggcgctatgagggacag
ctgcggcataagaccgaacaggtgaaggcgctgcttgcccagcacggatttgatccggac
gttgtgcgcgagacgatcgggatggaacatccgtggcattaccgcaataaaatggagttt
acgttctctcctgagggcctgcttggactgcacgagcaagggaatttccggcaagtgatt
tcgttggagacatgtctcattgccggcgagaagatcgtcaaagccgctatggaagtggcg
cgttgggcgcgcgatcatcagctgcctgggtatcacaaagacacccatgaagggctgctt
cgccacgtcatggtgcgcgagtcgtttgcgacaggagaggtgatggtggcgctctttgcg
accgaggcgccggaaggggagttgaaagaagcggcggctgatttgacggagcgggtcacg
aaggcgctcccagacgtgaaaagtttgctttggctggagaatcgggcgtgggccgaccgc
acccaggcggaacgaacgcacgtgctggccggacgggatttcatttacgatgaattgtgc
gggttccgctaccgtctttggtttgatacgtttttccaaacgaacccggtgcaggcggcc
aaattggttgaactggcgttggagatgggcgagcccaagccccatgagaaaatgatcgat
ctcttctgcggagtcggcacgttttccttgccgttcgccaagcgggtgaaggcgttggcg
ggcattgaaattgtggaaacgtcgatcgagtcggcgaaacgaaacgcgaaagacaacggc
gttgacaatacgtactttttggcacgggatgcgcggcgcgggattgatgacgtgttggag
cagttcgggcggccggagctgctgcttttggatcctccacgttctggcgcaggcggaaaa
gtgatgcgcaaaatcggccgggcgcaaccaaagcgggtggtgtatgtctcctgcaatccg
gagacgtttgtggctgatattgcggagctagccccgttcggctatgtgttgaaaactgtc
caaccggtggacatgtttccgcatacggcgcatgtcgagtgctgtgcgttgcttgtcaaa
tcatcataa
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