Halotalea alkalilenta: A5892_00115
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Entry
A5892_00115 CDS
T04333
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
haa
Halotalea alkalilenta
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haa03016
]
A5892_00115
Enzymes [BR:
haa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A5892_00115
Transfer RNA biogenesis [BR:
haa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A5892_00115
Prokaryotic type
A5892_00115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ANF56069
UniProt:
A0A172YA12
LinkDB
All DBs
Position
complement(22604..23524)
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AA seq
306 aa
AA seq
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MAKRRRGRPVDGVLLLDKPKGLSSNRALQRARGIFQAAKAGHTGTLDPMATGLLPICFGE
ATKFSSFALDADKRYLARVQLGITTDSGDAEGVVLEERPVPALDEAGIECVLARFRGEIE
QIPPMFSALKHQGRPLYELAREGREIERAPRRVTIYHMRLVSLDADAGWFDLEVDCSKGT
YIRTLGMDIGAALGCGAHLSALRRLRTGPFEASAMVGLDALEALGEERDVRLLPVDALIA
HLPRLETDEPTALLLNQGRRIRCATGSHAPGTMARLYCDERLLGLVTVTEEGELAPRRLL
RDAANG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgccgtcggggccgtccagttgacggcgtgctgttgctcgataagccgaag
gggctgagttccaaccgtgcactgcagcgcgcacgtgggatattccaggccgccaaggcg
gggcataccggcacgctcgatccgatggccacggggctcttgccgatctgcttcggcgag
gcgaccaagttctcctcgttcgctctggatgccgacaagcgttatctcgcccgcgtccag
ctcggtatcaccaccgacagcggtgacgcagagggtgtggtgctggaagagcgcccggta
cccgcgctcgatgaagcgggcatcgagtgcgtgctggcgcgatttcgtggtgaaatcgag
cagattccaccgatgttctcagcgctcaagcatcagggccgtccgctctacgagctggcc
cgtgaagggcgcgagatcgagcgtgcgccgcggcgtgtaaccatttatcatatgcgcctc
gtttcgctcgatgcggatgccggctggttcgatctcgaggtcgattgcagcaagggtacc
tacattcgcacgcttggcatggacatcggcgcggcgcttggctgcggtgcgcatctcagc
gcgctgcggcggctgcgcacggggccgttcgaggcgagtgcgatggtgggcctggatgcg
ctcgaggcattgggcgaggagcgcgatgtgcgactgttgccggtcgatgcgctgatcgca
cacctgcccaggctcgaaaccgatgagccgaccgccctgctgttgaaccaggggcggcgg
attcgctgtgcaaccggttctcatgccccgggcaccatggcgaggctgtactgcgacgag
cgcctgctggggctcgtcaccgtgacggaggagggcgagctcgctccccgacgtctcttg
cgtgacgcggccaacggctga
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