Halotalea alkalilenta: A5892_09590
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Entry
A5892_09590 CDS
T04333
Name
(GenBank) hypothetical protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
haa
Halotalea alkalilenta
Pathway
haa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A5892_09590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haa03400
]
A5892_09590
Enzymes [BR:
haa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A5892_09590
DNA repair and recombination proteins [BR:
haa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A5892_09590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
AAA_30
RPA_interact_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANF57686
UniProt:
A0A172YEZ9
LinkDB
All DBs
Position
2161011..2164778
Genome browser
AA seq
1255 aa
AA seq
DB search
MALMDQPLDIPRLPLSGRRLIEASAGTGKTYTIAALYVRLVLGHGSEHGFARPLAPSEIL
VVTFTRAATEELRERIRARLREARDALLGRLPPDATLAALLAEYQGDVALAQARRLDQAV
RMMDDAAIFTIHGFCQRMLKRHAFDSGTRFAVELTAEGSALFEQGLEDYWRRHFYPLDSD
AQALIQSYWEGPAALSEALAIPLGADVERRLLWRGKEGEALVEAPGSVLDALAPCRAGLA
RAADAAARVRAAFDSQALEALFEQALAEKVFAANRVSKASLAPRLDALRQWCAGHAPLLP
QALLDDKGRAWLGAARLEAAAKKGCQPPEHALFDALDALAECQAGLVDARPALIAHALEV
IERELAARKRSEALLDFDDLLVELDQALAGPLGERLARSIRAELPVALIDEFQDTDARQY
RIFERIYPGGPGAGAPGVQGSEAMPHALLLIGDPKQAIYAFRNADVGTYLAARQRVEARY
TLKRNFRSSVAMVEAVNRLFSLSSMPFRDPGIVFTPSEAQGRAERLACDGETIAALTCWL
PASDASVDRASYLRTMSEAVRADIQRLLEGAGAGRAGFVGEQGSLVPLRAADIAILVRTG
TEALAVREALARGGIKSVYLSQKASVFETQEAFWLLQLLEAVAQPKRDRALRAAIATRLL
SDQLDEVARLIDDERHWESMVERFEDYHRDWRRVGVLAMIRRVMHDFDVGARLLARDDGE
RILTDLLHLAELAQSASQALDGEQALLRWLHRALSGRFERGLDPEALIQRLESDEELVRV
VTIHKSKGLEYPLVYLPFPCDYRRLDRPQGPLVVDHPEYGRVVALAPDDGLVALADEARL
AEDLRLLYVALTRARYACRIGIAPLYKGRRLRGDDDDATTLEHSALGTLLNDGAALGGRV
LRERLEALADGRVIALAPPPEPPPRPLVATSEPLVPRQARRFGGEIARGWWISSYTALVE
DARRGDGDEETPGIALLPAGLDLEVSDERTPVPAPPLGRINDFPRGPRAGTFLHTLLEAL
DFDRLAEPDYRIELDALVEHRLRRSAFDPGWRQPLQEWLGRLLGASLDPELPGLRLDALG
AWKAELEFWLPVAPTQAGHIDRLIRRFEPLGAEADYPTLAPRRLEGMLRGFIDLVFCFEG
RWYLLDWKSNHLGDSGEAYREQGLLQAIVSHRYDVQYVLYTLALHRHLRVRIEDYDYERH
FGGVLYLFLRGVDAERTDQGVFRRRPSPVLIEALDRLLAGDASVGVAVEEIANGG
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcatggaccaaccgctggatatcccccgtcttccgctcagcggccgccgcctg
atcgaggccagcgccggtaccggcaagacctacaccatcgccgcgctctacgttcgcctg
gtgctcggccacggctcggagcacggcttcgcacgcccgctcgcgccgagcgagatcctg
gtcgtcaccttcactcgcgccgccaccgaggagctgcgcgagcgcattcgcgcgcgcctg
cgcgaggcacgcgatgcgctgctcgggcgccttccaccggatgcgacactggcggcgctg
cttgccgagtaccagggcgacgtggccctcgcccaggcgcggcgtctcgaccaggcggta
cggatgatggatgacgcggcgatcttcaccatccacggcttttgccagcggatgctcaag
cgtcatgccttcgacagcggcacccgcttcgcggtcgaactcaccgccgagggatccgcg
ctgttcgaacaggggctcgaggactactggcggcggcacttctatccgctcgacagcgac
gcccaggcgttgatccagagctactgggaagggcccgccgcgcttagcgaggcgctggcg
ataccgctcggcgccgatgtcgagcgtcggctgctgtggcgcgggaaggagggcgaggcg
ctggtcgaggcgcctggctcggtgttggatgcgctggctccgtgccgtgccgggctggcc
cgtgccgccgacgcggcggcacgggtgcgcgcggctttcgattcgcaggccctcgaagca
ctgttcgagcaagcgctggcggagaaggtctttgccgccaaccgggtctccaaggcaagc
ctcgcacctcggctcgatgcgctgcgccagtggtgtgccggccatgcgccgctgctgccc
caggcgctgctcgacgacaaggggcgcgcctggctcggcgcggcgcggctcgaggcggcg
gcgaagaaaggatgccagccgccggagcatgcgctgttcgacgcgctcgatgcgctcgcc
gagtgccaggccgggctggtcgacgcccgcccggcgctgatcgcccatgcgctggaagtg
atcgagcgcgagctcgccgcgcgaaagcgcagcgaggcgctgctcgatttcgacgatctg
ctggtcgagctcgaccaggccctggccggcccgctcggcgaacgactcgcgcgcagcatc
cgcgccgagctgccggtagcgctgatcgacgagttccaggacaccgacgctcgccagtac
cggatcttcgagcggatctatccagggggacccggcgctggcgcgcccggtgtccagggc
agtgaggccatgccccatgcgctgctgttgatcggtgatcccaagcaggcgatatatgcc
tttcgcaatgccgatgtaggcacctatcttgccgctcgccagcgggtcgaggcgcgctat
acgctgaagcgcaacttccgctcgagcgtggcgatggtcgaggcggtcaatcgcctgttt
tcgctctcatcgatgccctttcgcgatcccggcatcgtgttcaccccgagcgaggcgcaa
gggcgtgccgagcgattggcctgcgacggcgagaccatcgcggcgttgacctgctggctg
ccggcgtcggacgcgagcgtggaccgcgctagctacctgcgtacgatgagcgaggcggtg
cgggcggacatccagcggctgctcgaaggggccggcgctggccgggccggcttcgtcggc
gagcagggcagcctggttccgctgcgcgccgccgatatcgccatcctggtgcgcaccggc
accgaggcgctggcggtgcgcgaggcgctcgcccgcggtgggatcaagagcgtctacctg
agccagaaggcctcggtgttcgagacccaggaagcgttctggctgctccagctgctcgag
gcggtggcgcagcccaagcgtgatcgcgcgctgcgcgcggcgatcgccacccgattgctc
tccgaccagctcgatgaggtcgctcggctgatcgatgacgaacgccattgggagtcgatg
gtcgagcgtttcgaagactatcaccgcgactggcgtcgggtcggcgtactggcgatgatc
cgccgggtgatgcatgacttcgatgtcggcgcgcggctgctcgcccgggacgacggcgag
cgcatcctcaccgacctgctccatctcgccgagctggcccagagcgcgagccaggcgctc
gatggtgaacaggcgctgctgcgctggctgcaccgcgcgctgagcgggaggttcgagcgt
gggctcgaccccgaggcgctgatccagcggctggaaagcgacgaggagctggtgcgggtg
gtgaccatccacaagtccaaggggctcgagtatccgctggtctacctgccgtttccctgc
gattaccggcggctcgaccggccgcaaggcccgctggtggtcgatcaccccgagtatggc
cgggtggtggcgctggcgcccgacgatggactggtcgcgctcgccgacgaggctcgtctg
gccgaggatctgcgcctgctctatgtggcgctgacccgggcccgctacgcttgccgtatc
ggcatcgcgccgctttacaaaggccgtcgcctgcgcggtgacgacgatgacgccaccacg
ctcgagcatagcgcgctgggcacattgctcaatgatggtgccgcgctcggcggccgcgtg
ctgcgtgagcggctcgaagcgctggccgatggccgagtgatcgcgctcgcgccgcctccc
gagccgccgccgcggcccctggtggcaacgtccgagcctcttgtaccgcgccaggcgcgg
cgcttcggcggcgagatcgcccgcggctggtggatctcctcctataccgcgctggtcgag
gatgcccggcgcggcgacggcgatgaggagacgcccggcatcgcgctgttgcccgcgggg
ctcgatctcgaggtatctgatgagcgcacgccggtgcccgcgccgccgctgggccggatc
aacgactttcccaggggcccgcgtgccggcaccttcctgcacacgctgctcgaggcgctc
gacttcgaccggctggccgagccggactaccgtatcgagctcgatgcgctggtcgaacac
cggctccggcgcagtgccttcgatcccggctggcgacagccgctgcaagagtggctcggg
cgactgctcggcgcgtcgctcgaccccgagcttcccgggctgcgtctcgatgcgctgggg
gcgtggaaggccgagctcgaattctggctgccggtggcaccgacccaggccgggcatatc
gatcggctgatccgccgtttcgagccgctaggcgcagaggcggactatccgacccttgca
cccaggcggctcgaaggcatgctgcgcggcttcatcgacctggtgttctgcttcgagggg
cgctggtacctgctcgactggaagtccaaccatctgggcgatagcggtgaggcctaccgg
gagcaggggctgctccaggcgatcgtcagccaccgctacgacgtccagtacgtgctctac
accctggcgctacatcgtcacctgagggtacggatcgaggactacgactacgagcgtcac
ttcggcggcgtgctctatctgttcctgcgcggggtggacgcggagcgcaccgaccaaggg
gtattccggcgccgtccttcgccggtgttgatcgaggcgctcgaccggctgctggcgggg
gatgcaagcgtcggggtggctgtcgaggagatcgcaaatggcggctag
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