Halotalea alkalilenta: A5892_13995
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Entry
A5892_13995 CDS
T04333
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
haa
Halotalea alkalilenta
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haa03016
]
A5892_13995
Enzymes [BR:
haa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A5892_13995
Transfer RNA biogenesis [BR:
haa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A5892_13995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
EPL1
PilZ
CSD
Motif
Other DBs
NCBI-ProteinID:
ANF58443
UniProt:
A0A172YGT7
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All DBs
Position
3134422..3136365
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AA seq
647 aa
AA seq
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MLSNNPLLAQLKQQLHAETPRVTGVVKATDKGFGFLEAEDGQSYFVPPPMMKKVVHGDRV
EAVVHVQGEKKSVEPETLVEPSLERFIGRVRRREGRLGVVPDHPSINLALNARAKRGIDE
AGLEEGDWVVARLLRHPLRPDDRSFLVQIEELISRHDQPNVPWRVTLARHVLEYASPVDG
SECSLRDEGLEREDLTALPFFTIDSRTTRDMDDALHIEAREEGGWRLRVAIADPTAFVAE
DDAVDQEARRRAFTVYLPGQNVTMLPERLADDLCSLRENETRAALACTLEVAADGELLDY
RFYAAEVRSHAQLAYDDVSDWIEGKGEWKPVFPRGEEQLRQLADFTEARSAWRSRNAIVF
KDRPDYAFELDAEGRVLAVRTEPRRIANRMVEESMIAANVCCARLLGEEVGHGIFNVHLG
FAAEKLDHALAFLAEQSIEASREQLTDLDAWRALRYQLDERDDAWLEARLRRFQGYTAMT
AAPGPHFGMGLPAYATWTSPIRKYGDMINHRLIKALLLAQARPASASETLTAHLSERRKL
NRMAERDVKDWLYVRHLAPAVGSGQRFEAEIVDIRRGGLRVRLNDNGASVFVPASTLEAD
REALVIDDKEGVVSVRGEQRYRLGDIIEVVLSEAREETRSLIGRPVS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgaacaaccctctcctcgctcagctgaagcagcagctccatgccgagacgccc
cgcgttaccggtgtcgtcaaggccaccgacaaaggcttcggctttctcgaggccgaggac
ggacagtcctacttcgtccccccgccgatgatgaagaaggtggtccacggcgaccgtgtc
gaagcggtcgtccatgtccagggcgagaagaagagcgtcgagccggaaaccctggtcgag
ccctcgctcgagcgcttcatcggccgggtgcgtcgccgcgaaggccgtctcggcgtggtg
ccggaccatccatcgatcaatctcgcgctcaatgcccgcgccaagcgcggcatcgacgag
gcggggctagaggaaggcgactgggtggtggcgaggctgctgcgccacccgctgcgcccc
gacgatcgttcgtttctggtccagatcgaggaattgatcagccgtcacgaccagcctaac
gtaccgtggcgcgtgacgctggcacggcatgtgctggagtacgcctctccggtcgatggg
tcggagtgcagcctgcgcgatgaaggactcgagcgtgaggacctcaccgctctgccgttt
ttcaccatcgacagccgcaccacccgcgacatggacgacgcgctgcacatcgaggcacgc
gaggaaggcggctggcgcctgcgggtcgcgatcgccgacccgaccgcattcgtcgccgag
gatgacgcggtggaccaggaggcccggcggcgcgccttcaccgtctacctgccgggacag
aacgtcaccatgctgcccgagcggctcgccgacgatctctgctcgctgcgcgagaacgag
actcgcgcggcgctggcctgcaccctagaggtcgcggccgacggtgaactgctcgattac
cgtttctacgctgccgaagtgcgctcccacgcccagctcgcctatgacgatgtctccgat
tggatcgagggcaagggcgaatggaagcccgtcttcccccgtggtgaagagcagctgcgc
cagctcgcagacttcaccgaggcgcgcagtgcctggcggtcacgcaacgcgatcgtgttc
aaggatcgccccgactacgccttcgagctcgacgccgagggccgcgtactggcggtgcgc
acggagccgcggcggatcgccaaccgcatggtcgaggagtcgatgatcgccgccaacgtc
tgctgcgcgaggctgctcggcgaagaagtcggccatggcatcttcaacgttcatctcggc
ttcgccgcggagaagctcgaccatgcgctggccttcctcgccgagcagtcgatcgaggcg
agccgcgaacagctcaccgatctcgacgcttggcgtgcgctgcgctaccagctcgacgaa
cgcgacgacgcttggctcgaggcacggctgcgccgcttccagggctacactgcgatgacc
gcggcaccgggcccgcatttcggtatgggactgcccgcctatgccacctggacctcgccg
atccgcaaatacggcgacatgatcaaccaccggttgatcaaggcgctgctgctcgcgcag
gcacggcccgcaagcgccagcgagacgctcaccgctcatctctccgagcggcgcaagctc
aaccgcatggccgagcgcgacgtcaaggactggctctacgtgcgccatctggcgcccgcg
gtgggcagtggccagcgcttcgaggccgagatcgtcgacatccgccgcggcggcttgcgg
gtacggctgaacgacaacggcgcttcggtgttcgtccccgcctcgaccctcgaggccgac
cgtgaagcgctggtgatcgacgacaaggaaggcgtggtctctgtgcgcggcgaacagcgc
tatcgcctcggcgacatcatcgaggtagtgctcagcgaagcccgcgaagaaacccgttcg
ctaatcggtcgccccgtctcctga
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