Halotalea alkalilenta: A5892_15360
Help
Entry
A5892_15360 CDS
T04333
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
haa
Halotalea alkalilenta
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haa03019
]
A5892_15360
Enzymes [BR:
haa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A5892_15360
Messenger RNA biogenesis [BR:
haa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A5892_15360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
Flavi_DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANF58673
UniProt:
A0A172YHI7
LinkDB
All DBs
Position
complement(3441525..3444038)
Genome browser
AA seq
837 aa
AA seq
DB search
MVQHLALSHLSPLSPLPVDALLDELKSCLGQRDEAVLEAMPGAGKTTRVPLALLDSPWLA
GRRILLLEPRRLAARAVAERLAEQLGERPGGRVGYRMRLDSRIGPKTQLEVVTVGVLLRR
LQRDPALEDVGLVIFDEFHERHLDADLGLALCLAGRELLREPGDPLKLLVMSATLDTERI
AGLLGDAPRLSSQGRLYPVAMRYAATPLRLDDWRGLEARLVETLDAALVEQSGDLLVFLP
GKAEIRRLATRLEGRWPGPGAPRVLPLHGELPLERQRAAIAPDPQGRRRIVLASAIAETS
LTVEGVRVVIDAGFSRAPRFDPSRALTRLETRRVSKAQADQRAGRAGRLAPGVCHRLWSE
SQQATLAPYARAEILEADLGAMLLQALCFGAEPEQLRWLDPPPFAALAQARGLLRTLGAL
DGDGRLTAHGEAMAELPLPPRLGHMLLRGRELGQGALGCELAALLEERGAGAGLDLAARV
GAVGAAQRQARRYRRLLGIEEQTVETSAWSGALLAFAFPDRIARQRSPGGVDYLLANGRA
AHFQMLDPLCRSQWLVIAELGGRQGERSEVIRQAVELDPSLFEGCLAPLLEVSERCEWPA
RSDAMLIERQWRVGELVVRRAALESHDSSLLLDAQLAFVRARGLELLPWTPALMQLRARV
ALLRRIELERGGESRWPALDDDALLDGLERWLAPWLQGIHRVAHFERLPLEQALLAQLPW
PLPAELERLAPSHLLLPSGSRARLDYDPEGVAPPVLAARLQELFGATVTPSVADGRQPVV
LHLLSPARRPVQVTSDLASFWRSGYPEVKKELKGRYPKHCWPDDPLKAEPTARTKPR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacttggctctttctcatctctcaccactctctccactgccggtcgatgcg
ctgctcgacgagctgaaaagctgcctgggccagcgcgacgaggcggtgctcgaagcgatg
ccgggcgccggcaagaccacccgggtgccgctggcgctgctcgactccccctggctcgcc
gggcgtcggatccttttgctcgagccgcgccggctcgccgctcgcgcggtggctgagcgc
ctcgctgagcagctcggcgagcgtcccggcggccgggtcggctatcgcatgcgcctcgat
agccgcatcggtcccaagacccagctcgaggtcgtcaccgtcggtgtgctgctgcgccga
ttgcagcgcgatcccgcgctggaagacgttgggctggtgatcttcgatgaattccatgag
cgccacctcgatgcggatctcgggctggcgctgtgtcttgccgggcgtgaactgctgcgc
gagcccggtgacccgctcaagcttttggtgatgtccgcgacccttgatacggagcgcatc
gccggactgctcggcgatgcgccgaggctctcgagccagggccggctgtatccggtagca
atgcgctatgccgcaacgccgttgcgactcgacgactggcgggggctcgaggcgaggctg
gtcgaaaccctcgacgccgcgctggtcgagcagtccggtgatctgctcgtgttcctgccc
ggcaaggccgaaatccgccgtctcgctacgcggctcgaggggcgctggcccggccctggt
gccccccgagtgctgcctttgcacggtgaactcccgctcgaacgccagcgagcggcgatc
gcgccggatccgcaagggcgccggcgcatcgtgcttgcgagcgctatcgccgaaaccagc
ctgaccgtcgagggcgtgcgtgtggtgatcgatgcgggtttctcccgcgcgccgcgcttc
gatccgagccgggcgctgactcgcctcgagacacgtcgtgtatccaaggcccaggccgac
cagcgcgccgggcgcgcgggccggcttgcgcccggtgtctgccatcgattgtggagcgaa
tcccagcaggcgacgcttgcaccctatgcccgtgccgagattctcgaggccgatctcggc
gcgatgctgctccaagcgctgtgcttcggtgccgagcccgagcagctgcgctggctcgat
ccacccccgttcgcggcactggcccaggcgcgcgggctgctacgcacgctgggtgcgctc
gacggtgatggacgcctgaccgctcacggcgaggcgatggccgaactgccgctgccgccg
cgcctggggcacatgctgctgcgcggtcgcgagctcggccagggagcgcttggttgcgaa
ctcgccgcgctgctcgaggagcgcggtgcgggcgcggggctcgacctcgccgccagggtc
ggtgccgttggcgcggcccagcggcaggcccggcgctaccgtcgcctgctgggtatcgag
gagcagactgtcgagacctcggcttggagcggggcgctgctcgctttcgcctttcccgac
cggatcgcccgccagcgctcccccggtggcgtcgactacctgctcgccaacggccgcgcg
gcgcatttccagatgctcgatccgctgtgtcgctcgcagtggctggtgatcgccgagctg
ggcgggcgccagggggagcgcagcgaggtgatccgccaggccgtcgagctcgatccctcg
ctgttcgaaggctgcctggccccgctgctggaagtgagtgagcgctgcgagtggccggcg
cgcagcgatgcgatgctgatcgagcggcagtggcgagtcggcgagctggtggtgaggcgc
gcggcactcgagagtcacgactcgtcgctgttgctggatgcccagctcgccttcgtgcgc
gcgcgtggcctcgaactgctgccttggacccctgcgctgatgcagctgcgcgccagggtt
gcgctgctgcgccggatcgagctcgagcgcggcggcgagagccgctggccggcgctcgat
gacgatgcgctgctcgacgggctcgagcgctggctcgccccttggctgcagggcattcac
agggtcgcccacttcgagcgcctgccgctcgagcaggcgctgctcgcccagctgccctgg
ccgctgccggcggagctcgagcggttggcgccgtctcatctgctactgccctcgggcagc
cgcgcacggctcgactacgaccccgagggcgtcgcaccgccggtactcgccgctcggctg
caggagctgttcggcgccaccgtcaccccgagcgtcgccgatggccggcagccggtggtc
ctgcatctgctttctcccgcgcgccggccggtccaggtgaccagcgacctggccagtttc
tggcgtagtggctatcccgaagtgaagaaagagctgaaagggcgctaccccaagcattgt
tggcccgatgacccgctcaaggccgagcctaccgctcggaccaagccgcgctag
DBGET
integrated database retrieval system
