Halotalea alkalilenta: A5892_18685
Help
Entry
A5892_18685 CDS
T04333
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
haa
Halotalea alkalilenta
Pathway
haa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A5892_18685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haa03400
]
A5892_18685
Enzymes [BR:
haa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A5892_18685
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A5892_18685
DNA repair and recombination proteins [BR:
haa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A5892_18685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ANF59232
UniProt:
A0A172YJ92
LinkDB
All DBs
Position
complement(4187906..4188721)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETTRRGIAPFVENERIEEVTVRESRLRSPVPADLAERVVGERVGSIMRRAKYL
LLPVGGGHLLWHLGMSGSLRLTRGQDAPKRHDHIELRMSSGWLLRYHDPRRFGALDFITG
DPLADRRLIRLGPEPLSDDFDGDRLHRLSRGKRAAVKTFIMDNAVVVGVGNIYAAEALFI
AGIDPRRAAGRISLERYRLLCVAIKQVLAAAIEQGGTTLRDFVSGQGEPGYFAQRLNVYG
RAGEPCRRCAAPLLQVTLGQRASVFCATCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgaaaccaccaggcgcggaatcgctcccttcgtcgagaac
gaacgtatcgaggaagtgacggtgcgcgagtcgcgcctgcgctcgccggtacccgcggat
ctcgccgagcgtgtcgtcggtgagcgggtggggtcgatcatgcgccgggcgaagtacctg
ctgctgccggtcggtggggggcacttgctttggcatctgggcatgtccggcagcctgcgc
ctgacccgaggccaggacgcgcccaagcggcacgaccacatcgagctgaggatgagttcg
ggctggctgctgcgctaccatgatcctcgccgtttcggcgcgctcgacttcatcaccggc
gaccccttggccgatcgccgactgattcgcctcggcccagagccgctctccgatgacttc
gatggggatcgcctccatcggctgtcgaggggcaagcgcgcggcggtgaagaccttcatc
atggacaacgcggtggtggtcggcgtcggcaatatctatgccgccgaggcgctgttcatc
gccggcatcgatccgcgccgcgcggcgggtcgtatttcgctcgagcgctaccggttgctc
tgcgttgcgatcaagcaggtgcttgccgcggcgatcgagcagggtggcaccacgctgcgc
gatttcgtcagcggccagggtgaaccgggctacttcgctcaaagactcaacgtctacggt
cgcgctggcgagccttgccgccgctgtgcggccccgttgctccaggtcaccctggggcag
cgggccagcgtgttctgcgcgacctgccagcgctga
DBGET
integrated database retrieval system
