Halotalea alkalilenta: A5892_18960
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Entry
A5892_18960 CDS
T04333
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
haa
Halotalea alkalilenta
Pathway
haa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A5892_18960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haa03400
]
A5892_18960
Enzymes [BR:
haa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
A5892_18960
DNA repair and recombination proteins [BR:
haa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A5892_18960
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A5892_18960
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A5892_18960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
DUF6832
Motif
Other DBs
NCBI-ProteinID:
ANF59277
UniProt:
A0A172YJ81
LinkDB
All DBs
Position
complement(4247461..4248918)
Genome browser
AA seq
485 aa
AA seq
DB search
MPEPSFLFHDYETFGADPRRDRPSQFAAIRTDVEFNQIGEPEVIYCRQADDYLPHPQACL
ITGITPQRANRRGLPEAEFAARIQALMSVPGTCSLGYNTLRFDDEVSRHLFYRNLLDPYG
REWQNGNSRWDLIDAVRTFYALRPQGIEWPMREDMEGRKVPSFKLEQLTAANGIEHVGAH
DALSDVRATISLARLLRERNAKLFDYLLGLRDKHRVKALLDVDSRKPMIHVSRRYPAAQG
CSALVAPLARHPSNPNGVIVCDLSADPEPLLALSAEEIRARVFVSRAELAEGLERIPLKV
VQVNRSPALLPVKALDESAAARLGIDRERSESHWQRLAQVEGLAAKVAEVFAEPPPEGST
DPDLMLYSGSFFSSSDKRAMAEVHQHLGWDLVGLNPMFQDARLPEMLFRMRARSYPETLE
GADREHWDQLRWERFNSPQLSSLTLQGFAREIERLNREPLSERDRQLLEELVMHVEAIMP
PQAFE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagccaagcttccttttccacgactacgaaaccttcggtgccgaccctcggcgc
gaccgcccatcgcagttcgcggcgatccgaaccgacgtcgagttcaaccagatcggtgag
cccgaggtgatctactgtcgtcaggcggatgattatctgccccatccgcaggcctgcctg
atcaccgggatcaccccgcagcgagccaatcgccgcgggctgccggaggcggagttcgcc
gctcgtatccaggcgctgatgagcgtgccggggacctgctcgcttggctacaacaccctg
cgcttcgatgacgaggtgagccgtcacctcttctaccgcaacctgctcgacccctatggg
cgggagtggcagaacggcaattcgcgctgggacctgatcgatgcggtgcgcaccttctac
gcgctgcgtccgcagggcatcgaatggccgatgcgggaagacatggaaggccgcaaggtg
ccgagtttcaagctcgagcagctcaccgccgccaacggcatcgagcatgttggcgcccac
gatgcgctctccgacgtacgcgcgacgatctcgctcgcccggctgctgcgcgagcgcaac
gccaagctgttcgactacctgctcggcctgcgtgacaagcatcgggtcaaggcgctgctc
gacgtcgactcgcgcaaaccgatgatccatgtctcccgccgctatcctgcagcgcaaggc
tgcagcgcgctggtcgcgccgctggcacgccatcccagcaaccctaatggggtgatcgtc
tgcgatttgtcggccgaccccgagccgctgctcgcgctctcggccgaagagatccgcgcg
cgggtattcgtcagccgagccgaactggccgaggggctcgagcggattccgctcaaggtg
gtgcaggtcaatcgcagcccggccctgctgccggtgaaggcgctcgacgagagcgccgct
gcgcgcctgggcatcgaccgcgagcgttccgagtcccactggcagcggttggcccaggtc
gagggactggcggcgaaggtggccgaggtgttcgccgagccgcctcccgaaggcagcacg
gatcccgatctgatgctctactcagggagcttcttttcgtcctcggacaagcgcgcaatg
gccgaggtgcaccagcatctcggctgggatctggtcgggctcaatcctatgttccaggat
gcccgcctgccggaaatgctgttccgtatgcgcgcgcgcagctatcccgagaccctcgaa
ggggctgaccgcgagcattgggaccagctgcgctgggagcgtttcaattcgccccagctc
tcctcattgacccttcaaggcttcgcccgcgagatcgagcggctcaatcgcgagccgctg
tccgagcgtgaccgccaactgctggaagagctggtgatgcacgtcgaagcgatcatgccc
ccgcaagcgttcgagtag
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