Halotalea alkalilenta: A5892_19520
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Entry
A5892_19520 CDS
T04333
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
haa
Halotalea alkalilenta
Pathway
haa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A5892_19520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haa03021
]
A5892_19520
03400 DNA repair and recombination proteins [BR:
haa03400
]
A5892_19520
Enzymes [BR:
haa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A5892_19520
Transcription machinery [BR:
haa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A5892_19520
DNA repair and recombination proteins [BR:
haa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A5892_19520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
DUF3150
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ANF59382
UniProt:
A0A172YJP6
LinkDB
All DBs
Position
complement(4357869..4362077)
Genome browser
AA seq
1402 aa
AA seq
DB search
MKDLVKVLKSQAQSEEFDSIKISLASPEMIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRMKHRGIICEKCGVEVTKAAVRRERMGHIELASPVAHIWFLKSL
PSRIGMLLDMTLRDIERVLYFESFVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM
GAEAVQALLADIELGEEIERLREEIPQTNSDTKVKKLSKRLKLLEAFFKSGNKPAWMVME
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPA
LRLHQCGLPKKMALELFKPFIYSKLQLNGQASTIKAAKKMVEREVPEVWDILADVIREHP
VLLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNVLSPANGDPIIVPSQDVVLGLYYMTREKIGAKGEDMVFSNLSEVERAFGTQ
SVALHARIKVRLTEWIKDEESGELTENTAIRDTTVGRALLFTILPKGMSFDIIDRPMKKK
AISQLINTAYRRVGLKDAVILADQLMYTGFRMATWSGASIGVNDFVIPASKASIIDAAEQ
EVKEIEDQFSSGLVTAGEKYNKVIDIWSKANDKVAKAMMVGISKESVINRKGEEVEQDSF
NSVFIMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDVVITDIDCGTEEGLTLHPVIEGGDVIVSLAERV
LGRVTAQDVLDGQDNVLIPRGTLLDEEWCSRLDTMGVDEIVVRSTITCETTHGVCAQCYG
RDLARGHLVNVGESVGVIAAQSIGEPGTQLTMRTFHIGGAASRASAVDSVQVKHGGSVRL
HNMKSVERGDGKLVVVSRSSALAVADDHGREREYYKLPYGAELSVRDGDVVEAGQIVAKW
DPHTHPIIAEVTGSIQFSEMEEGQTMHRTVDEMTGLSSIEIIEAGSRPTSGRDKRPMIML
VDEKGQHVTLPGSNTPVQYMLPGNAIVSVDNGAKIDVGEVVARMPVEASGNKDITGGLPR
VADLFEARKPKEPAILAEISGTVTFGKETKGKRRLTITPSEGDPFEMLIPKWRQISVFEG
ENVEKGEVISDGPSNPHDILRLLGVSELAKYITAEIQDVYRLQGVGINDKHIEVIVRQML
RKVEVTDAADSELIQGDQVEFFRVLEENERLAAANRFPAKYERVLLGITKASLATESFIS
AASFQETTRVLTEASVTGKRDFLRGLKENVVVGRLIPAGTGLAHHAERRRRREESDRVLH
PTALDIEQQLGEQLTALDADED
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttggtgaaagtactcaaatcgcaggcgcagtcggaagagttcgactcgatc
aagatatcgctcgcctcaccggaaatgattcgttcgtggtcctacggcgaggtcaagaag
ccggaaaccatcaactatcggacgttcaagcccgagcgtgatggcctgttctgcgccaag
atattcggcccagtgaaggactacgagtgcctctgcggcaagtacaagcgcatgaagcac
cgcggcatcatctgcgagaagtgcggcgtcgaagtgaccaaggccgcagtgcgccgcgag
cgcatggggcatatcgaactggcctcgccggtcgctcacatctggttcctcaagtcgctg
ccaagccgtatcggcatgctgctcgacatgaccttgcgtgacatcgagcgggtgctctac
ttcgagtccttcgtggtcatagacccgggcatgactacgctcgagaaaggccagctgctc
aacgacgagcagtatttcgaggctctcgaggagttcggcgacgacttcgacgcgcgtatg
ggtgccgaggctgtccaggcactgcttgccgatatcgagcttggcgaggagatcgagcgg
ctgcgcgaagaaattccgcagaccaattccgacaccaaggtgaagaagctctccaagcgg
ctcaagctgctcgaagccttcttcaagtccggcaacaagccggcctggatggtgatggaa
gtgctgccggtgctgccgcccgacctgcgcccgctggtgccgctcgacggtggccggttc
gccacctccgatctcaacgatctctatcgtcgggtgatcaaccgtaacaaccgcctcaag
cggctgctcgatctcaacgcgccggacatcatcgtgcgcaatgagaagcgcatgctgcag
gagtcggtcgatgcgctgctcgacaacggtcgccgcggccgtgcgatcaccgggtcgaac
aagcgcccgctgaagtcgctcgccgacatgatcaagggcaagcaggggcgtttccgccag
aacctgctcggcaagcgcgtcgactactccggtcgttcggtcatcaccgtcgggccggct
ctgcgcctgcatcagtgcggcttgccgaagaagatggcgctcgagctgttcaagccgttc
atctattccaagctgcagctcaatggccaggcgtcgacgatcaaggccgccaagaagatg
gtcgagcgcgaagtgcccgaggtgtgggatatcctcgccgacgtcattcgcgagcacccg
gtgctgctcaaccgtgcgccgaccctgcaccgcctcggcatccaggctttcgagccgctg
ctgatcgaaggcaaggcgatccagctccacccgctggtctgcgcggcttacaacgctgac
ttcgacggtgaccagatggcggtccacgtgccgctgacgctggaagcccagctcgaagct
cgtgcgctgatgatgtcgaccaacaacgtgctttcgccggccaacggtgacccgatcatc
gtgccgtcgcaggacgtggtgctcggtctctactacatgacccgcgagaagatcggcgcg
aagggcgaggacatggtgttctcgaacctgagcgaggtcgagcgcgccttcggcacccag
agtgtcgccttgcatgctcggatcaaggtacgcctgaccgagtggatcaaggacgaagag
agtggtgagctcaccgagaacaccgcgattcgcgacaccactgtcggccgcgcgctgctg
ttcacgatcctgcccaagggcatgagcttcgacatcatcgaccggccgatgaagaagaag
gcgatctcgcagctgatcaatactgcctatcgtcgtgtcggcctgaaggatgcggtcatt
ctcgctgaccagctgatgtacaccgggtttcgcatggcgacctggtcgggtgcatcgatc
ggggtcaacgatttcgtcattccggcctccaaggcctcgatcatcgatgccgccgagcag
gaagtgaaggagatcgaagatcagttctcctccggcctggtcactgctggcgagaagtac
aacaaggtcatcgacatctggtcgaaggccaacgacaaggtcgccaaggcgatgatggtg
ggcatctccaaggagagcgtcatcaatcgcaagggcgaggaagtcgaacaggattcgttc
aacagcgtcttcatcatggctgactcgggcgctcgtggtagcgcggcccagatccgtcag
ctcgctggcatgcgtggcctgatggccaagccggacggctcgatcatcgagacgccgatc
accgcgaacttccgtgaaggcctgaacgtactccagtacttcatctcgactcacggtgcg
cgtaaaggtctggcggacaccgcgctcaagaccgccaactcgggttacctcactcgccgc
ctggtcgatgtcgcccaggacgtggtgatcaccgacatcgattgcggcaccgaagaaggc
ctgaccctgcacccggtgatcgaaggcggcgatgtcatcgtctcgctcgccgagcgtgtg
ctgggccgagtgaccgcccaggacgtactcgatggtcaggataacgtgctgattccgcgc
ggcaccctgctcgacgaagagtggtgctcgcggctcgacaccatgggcgtcgatgagatc
gtggtgcgcagcaccatcacctgcgagaccactcacggggtttgcgcgcagtgctacggc
cgtgatctggcccgcgggcatctggtcaacgtcggtgagtcggtcggggtcatcgccgcg
cagtcgatcggtgagccgggtacccagctgaccatgcgtaccttccacatcggcggtgcc
gcctcgcgtgcgtccgcagtggacagcgtacaggtcaagcacggcggcagcgttcgcctg
cacaacatgaaatcggtcgagcgtggagacggcaagctggtggtggtgtcccgctccagc
gccttggcggtcgccgatgaccacgggcgtgagcgcgagtattacaagctgccctatggc
gccgagctttcggttcgcgatggcgatgtggtcgaggctggacagatcgtcgccaaatgg
gacccgcacactcacccgatcatcgccgaggtcacggggagcattcagttctccgagatg
gaagaaggtcagaccatgcaccgtacggtggatgagatgaccggcctttcctcgatcgag
atcatcgaggctggtagccgtccgacctccggtcgtgacaagcggccgatgatcatgctg
gtcgacgagaagggacagcacgtcaccctgcctggctcgaacacgccggtgcagtacatg
ctgcccggcaacgcgatcgtctcggtcgacaacggcgccaagatcgacgtgggtgaagtc
gttgcgcgcatgccggtggaggcttccggtaacaaggacatcaccggtggtctgccgcgc
gtcgccgatctgttcgaagctcgcaagcccaaggagccggcgatcctcgccgagatctca
gggaccgtgaccttcggcaaggagaccaagggcaagcgccgcctgacgatcaccccgagc
gagggcgacccgttcgagatgttgatcccgaaatggcgccagatcagcgtcttcgagggt
gagaacgtcgagaagggcgaagtgatctcggacggcccgagcaacccgcacgatatcctg
cgcctgcttggcgtctcggagctggcgaagtacatcaccgccgagatccaggatgtctac
cggctgcagggcgtgggcatcaacgacaagcacatcgaagtgatcgtgcgtcagatgctg
cgcaaggtcgaagtcaccgatgccgccgacagcgagctgatccagggcgaccaggtcgag
ttcttccgggtgctcgaggaaaatgagcgcctcgcggcagcgaaccgtttcccggccaag
tacgagcgcgtactgctggggatcaccaaggcttcgcttgccaccgagtcgttcatctcc
gcggcatcgttccaggagaccactcgcgtgctcacagaggcctcggtcaccggcaagcgc
gacttccttcgcggcctgaaggagaacgtggtcgtcggtcgcctgatccctgccggtacc
ggtcttgcgcatcacgccgagcgtcggcgccggcgcgaggagtccgatcgcgtgctgcac
ccgaccgcgctcgacatcgaacagcagctcggcgagcagctgaccgcgctggatgccgac
gaagactga
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