Halalkaliarchaeum sp. AArc-CO: AArcCO_0008
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Entry
AArcCO_0008 CDS
T09489
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
haaa
Halalkaliarchaeum sp. AArc-CO
Brite
KEGG Orthology (KO) [BR:
haaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haaa03000
]
AArcCO_0008
Transcription factors [BR:
haaa03000
]
Prokaryotic type
Helix-turn-helix
Other families
AArcCO_0008
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7436
TrmB
PLDc_2
Regulator_TrmB
PadR
TbsP_N
HTH_9
Motif
Other DBs
NCBI-ProteinID:
UWG49340
LinkDB
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Position
complement(8243..9046)
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AA seq
267 aa
AA seq
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MASLRDLGLSEYEARAYRSLLRLGPTTAKELSRASEVPMGRIYDVLNSLEQYSLVRSQAA
SRPKKYVAVEPDAGLDRLLADRKAELERKAEQYEDVVDELSQELETAEPVDGHFWTAAVG
PDETLDLLLERISTAEREIVMVAGAPAAGLDLGEIGEQITDELEKALERGVSVSLLLSPD
VVDGLPRSVGRRYTERLADRENFSVRVATGLQGTFELIDDVEVCIEVSNPLDPGEAFAMI
DLKDPEFAGDVRESFEPRWENAKPLNL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcctccgcgatctcgggctctcggagtacgaggcccgggcctatcggtcactt
ctgcgtctcggcccgacgacggcaaaggagctgtcgcgggcgagcgaagtcccgatggga
cggatctacgacgtgttgaacagtctcgagcagtacagcctggttcggagccaggcagcg
agccggccgaagaagtacgtcgccgtcgagcccgatgcggggctcgatcgcctgctcgcg
gacaggaaagcggagctcgaacggaaggccgaacagtacgaggacgtcgtcgacgagctc
tcacaggaactggagaccgccgaaccggtcgacggccacttctggactgcggcggtcgga
cccgacgaaacgctggatctgctgctcgaacggatctcgacggccgaacgggagatcgtc
atggtggcgggcgcacccgccgcagggctggacctcggcgagatcggcgaacagatcacc
gacgagctcgagaaagcgctcgaacgcggcgtctccgtctccctgcttctctcgcccgac
gtcgtcgacgggctccctcggagcgtgggccgacggtacaccgaacggctcgccgaccgg
gagaacttctccgtccgcgtcgccaccggtttacagggcaccttcgagttgatcgacgac
gtcgaggtctgcatcgaagtgtcgaatcccctggatccgggcgaagcgttcgcgatgatc
gatctgaaggatccggagttcgccggcgacgtccgagagtcgttcgagccccgatgggag
aacgcgaaaccgctgaatctgtag
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