Halalkaliarchaeum sp. AArc-CO: AArcCO_0021
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Entry
AArcCO_0021 CDS
T09489
Symbol
sua7
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
haaa
Halalkaliarchaeum sp. AArc-CO
Pathway
haaa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AArcCO_0021 (sua7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haaa03021
]
AArcCO_0021 (sua7)
Transcription machinery [BR:
haaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
AArcCO_0021 (sua7)
Prokaryotic type
Archaeal type
TFB
AArcCO_0021 (sua7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DUF7437
zf-C2HC_3
Motif
Other DBs
NCBI-ProteinID:
UWG49353
LinkDB
All DBs
Position
complement(22851..23669)
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AA seq
272 aa
AA seq
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MHADGDETICSNCGLVVDADRIDRGPEWRSFADDDTNPERTGAPLTRSRHDRGLSTEIGH
TRVKGRKRRKFARLRRQHDRTKIRSKRERNQVYGFTEIRRMTDVLGLPEHVRDQACTLFD
SAQGESLLRGRSIEGFASACLYAACRVAGLARTVEEVVDVAKATPNEHEAAYDAMNRELG
LPVGPVPPAEYLPRFASQLDVGPEIERRARKLADRARENGVDVGRDPSGVAAACLYTAAH
VHGSSDLTQRAAADVADVTPVTIRNTFHDLLE
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgccgacggcgacgagacgatctgttcgaactgtggactggtcgtcgacgccgac
cgcatcgatcgcggccccgagtggcgctcgttcgcggacgatgacacgaaccccgagcgc
accggcgcgccgctgacccggtcgcgtcacgaccgggggctctcgaccgagatcggtcac
acccgggtcaagggacgcaagcgccgcaagtttgcccgtctccgccggcagcacgaccgg
accaagatccgatcgaagcgggaacggaaccaggtgtacggcttcacggagatccggcga
atgacggacgtgctggggttgcccgagcacgtgcgcgatcaggcgtgtaccctcttcgac
tccgcacaaggggagtcgctgctccgtggccggtcgatcgaggggttcgcctcggcgtgt
ctgtacgcggcgtgtcgggtcgccggactcgccaggaccgtagaggaagtcgtcgacgtc
gccaaagcaacaccgaacgagcacgaggcggcctacgacgcgatgaaccgcgaactcggc
cttccggtcggtccggttccgccggcggagtatctcccccggttcgcgtcacagctggac
gtcgggcccgaaatcgaacggcgagcccggaagctggccgatcgcgcacgcgagaacgga
gtcgacgtcgggcgcgatcccagcggcgtcgccgccgcctgtctgtacaccgccgcacac
gtgcacggatcgtcggatctcacacagcgggcggcagccgacgtcgccgacgtgacgccg
gtgacgatccggaacacgttccacgacctcctggagtga
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