Halalkaliarchaeum sp. AArc-CO: AArcCO_0083
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Entry
AArcCO_0083 CDS
T09489
Symbol
rli1
Name
(GenBank) Translation initiation factor RLI1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
haaa
Halalkaliarchaeum sp. AArc-CO
Brite
KEGG Orthology (KO) [BR:
haaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haaa03009
]
AArcCO_0083 (rli1)
Ribosome biogenesis [BR:
haaa03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
AArcCO_0083 (rli1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
AAA_23
AAA_16
AAA
AAA_22
AAA_29
AAA_14
Rad17
nSTAND3
Fer4
AAA_5
Fer4_6
AAA_24
NB-ARC
Fer4_7
PFK
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
UWG49415
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Position
81976..83787
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AA seq
603 aa
AA seq
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MADDSIAVVDLDRCQPDRCNYECSNYCPPNRTGKECITVRGEDTEEGDPDQIRISEEICL
GETCGICVQKCPFDAIEIRNLPSELSDDPIHRYGENAFALYGLPLPEPGRVTGILGPNGI
GKSTAVHALAGELVPNLGDHLADPEWERVLDRFRGTELQNYLERLIDGDVTVSRKPQYVD
RIPDQFSGRTRELLERTDERGDLDRLVDRLGIEPVMDQPIESISGGELQRVAIAAALARE
ADFYFLDEITPYLDISQRMTVARLIQELAEEENRSMLVVEHDLAILDLLADSLHVAYGQP
GAFGVITDPKSVRNGINEYLKGYLENENMRIRPSRIEFEEHAPRTGTTGNPLVEYPDLYK
SYGEGEFELTVEGGTVYESEVLGIVGPNGIGKSTLAKLFAGRLEPDEGDLDFRLDIAYKP
QYVEIDQPMRVDAFLSSITDDFGTSFWNTEIAQPLQLERIMEQNLTDLSGGERQRVAIAA
CLSEDADLYLMDEPSAHLDVDQRVQATSAIRRYAENHDATVMVIDHDIYMIDLLSDRLMV
FDGEPAARGHASKPQEMRAGMNDFLSDLSVTFRRDERTGRPRINKPGSQKDQQQKRDGEY
YYA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacagcatcgcggtcgtggacctggatcgctgtcagccggaccggtgcaac
tacgagtgctcgaactactgcccgccgaaccgcaccggaaaggagtgtatcacggtccgc
ggcgaggacaccgaagagggggatcccgatcagatccgtatctccgaggagatctgtctg
ggggagacctgcggcatctgcgttcagaagtgcccgttcgacgcgatcgagatccgcaac
ctcccctccgagctctcggacgatccgatccaccggtacggtgaaaacgcgttcgccctg
tacgggttgcccctccccgaaccgggtcgggtgaccgggatcctcggcccgaacgggatc
gggaagtcgactgcggtccacgcgctggccggcgaactcgtcccgaacctcggcgaccac
ctcgccgatcccgagtgggagcgagtgctcgatcggttccgggggacggagctgcagaac
tacctcgaacggctcatcgacggggacgtgaccgtttcgcggaagccgcagtacgtcgac
cggatcccggaccagttttcgggacggacccgcgagctgctcgaacgaaccgacgagcgg
ggcgatctcgatcggctcgtcgatcggctcggcatcgagccggtgatggaccagccgatc
gaatccatctccggcggcgagctccagcgggtggcgattgcggcggcactggcccgcgag
gcggatttctacttcctcgacgagatcacgccgtacctcgacatcagccagcggatgacc
gtcgcccggctgatccaggagctggccgaggaagagaaccggtcgatgctcgtggtcgaa
cacgacctggcgatcctcgatctgctcgccgactcgttgcacgtcgcgtacggacagccc
ggcgcgttcggcgtcatcaccgatcccaaatccgttcgaaacggaatcaacgagtacctg
aaaggctacctcgaaaacgagaacatgcggatccgcccctcccggatcgagttcgaggag
cacgctccccgaacggggacgaccgggaacccgctcgtggagtatcccgacctgtacaag
tcctacggcgagggcgagttcgaactgaccgtcgagggcgggaccgtctacgagtcggag
gtgctgggcatcgtcggtccgaacgggatcgggaagtcgacgctggcgaagctgttcgct
gggcggctcgaacccgacgagggcgatctcgacttccggctcgacatcgcctacaagccg
cagtacgtcgagatcgatcagccgatgcgggtcgacgcgttcctctcgtcgatcaccgac
gacttcggaacctctttctggaacacggaaatcgctcaaccactccagctcgaacggatc
atggagcagaacctcaccgacctctcgggcggggagcgccagcgggtggcgatcgcggcg
tgtctctccgaggacgccgacctctacctgatggacgagccgtcggcacatctcgacgtc
gatcagcgggtgcaggcgacgtcggcgatccggcggtacgccgagaaccacgacgcgacg
gtgatggtgatcgaccacgacatctacatgattgacctcctttcggatcgactgatggtg
ttcgacggagagcccgccgcccgggggcacgcctcgaagccccaggagatgcgggcggga
atgaacgatttcctctcggacctgtcggtcacgttccggcgcgacgagcgtacgggtcgg
ccccgcatcaacaagcccggttcccagaaggaccagcagcaaaagcgggacggcgagtac
tactacgcctga
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