Halalkaliarchaeum sp. AArc-CO: AArcCO_0289
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Entry
AArcCO_0289 CDS
T09489
Symbol
holB
Name
(GenBank) ATPase involved in DNA replication HolB, large subunit
KO
K04800
replication factor C large subunit
Organism
haaa
Halalkaliarchaeum sp. AArc-CO
Pathway
haaa03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
haaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AArcCO_0289 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haaa03032
]
AArcCO_0289 (holB)
DNA replication proteins [BR:
haaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
AArcCO_0289 (holB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
RCF1-5-like_lid
RuvB_N
AAA_30
DNAX_ATPase_lid
AAA_22
AAA_16
AAA_25
AAA_5
AAA_28
nSTAND3
DUF815
RNA_helicase
AAA_assoc_2
IstB_IS21
RsgA_GTPase
AAA_33
AAA_14
NACHT
NPHP3_N
Rad17
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UWG49616
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Position
280024..281595
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AA seq
523 aa
AA seq
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MTDWTESYRPRTLSEVRGNDKAREKLREWAENWDDHREAVVLYGSPGVGKTSAAHALASD
MGWKTVELNASDQRTADVIERFAGRAAKNATLAGSAAGGGARGGDTASRQLVILDEADNI
HGNYDRGGARAITRLVKEASQPIVLIANDYYEMSRGLRNACREIEFRDVSPRSIVPVLRN
ICRQESVEFEPDALQRIAERNAGDLRGAVNDLQAIAEGRDRITLEAVVTGDRDRTIGIFP
FLDAVLKEETPEEALRSGYDVDETPDDLAKWVEGNVLKAYDTDEAARAYEFLSNADVWLG
RVRASQDYSYWRYVTDNVAAGVAASRNGTKGGWTRWGRPQFWRSSDATAEEVVRKIAAAN
GSSMATARREILPYLSAVTHHCKPRELTVAMAAAYEFEEKHVSVVTGSGESTNKVQSIVE
DAESLREERMEDHAGGAFETRPNAGDDESDGERDGSGSAEEADESAGSGGENATLDELST
ADESDDATGGGENGGDENTDAENTDDENTDDEDDGQLSFGDFT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacagactggactgaatcgtatcgtccccgcacgctctcggaggttcggggcaacgac
aaggcccgagagaagctccgcgagtgggcggaaaactgggacgaccaccgggaggcagtc
gtcctgtacggcagccccggcgtcggcaagacctcggcggcacacgcgctcgcgagcgac
atggggtggaagaccgtcgaactgaacgcctccgatcagcgcaccgccgacgtcatcgag
cggttcgcgggacgggcggcgaaaaacgcaaccctcgcgggcagcgcggccggcgggggc
gcccgcggcggcgacaccgcctccagacaactggtgatcctcgacgaggcggacaacatc
cacggaaactacgaccgcgggggcgcccgggcgatcactcggctggtgaaggaggccagc
cagccgatcgtgctgatcgcgaacgactactacgagatgtcccgtgggctgcgcaacgca
tgccgggagatcgagttcagggacgtctcccctcgatcgatcgtgcccgtgttgcggaac
atctgccgccaggagagcgtcgagttcgagcccgacgcgctccagcggatcgccgaacgc
aacgccggcgatctccgaggggcggtaaacgacctccaggcgatcgcggagggtcgcgat
cggatcaccctcgaagcggtcgttacgggcgaccgggaccggacgatcggaatcttcccg
ttcctcgatgcggtgttgaaagaggagacgcccgaagaggcgctccggtcgggctacgac
gtcgacgagacgcccgacgacctcgcaaagtgggtcgaggggaacgtcctgaaggcgtac
gacacggacgaggcggcccgcgcctacgagttcctctcgaacgccgacgtctggctcggc
cgggttcgcgcgagccaggactactcctactggcggtacgtcaccgacaacgtcgccgcc
ggcgtcgccgcctcgcgcaacggaaccaagggcggctggacgcgatggggacgcccgcag
ttctggcggtcctcggacgcgaccgcagaggaggtcgtccggaagatcgcggctgcgaac
ggctcgagcatggcgacggcccgccgcgagatcctgccgtacctctcggcggtaacgcac
cactgcaagccacgggagctcaccgtcgcgatggcggccgcctacgagttcgaggagaaa
cacgtctccgttgtcaccggttccggcgaatcgacgaacaaggtccagtcgatcgtcgag
gacgccgagagcttgcgggaagagcggatggaggatcacgccgggggcgcgttcgaaacc
cgcccgaacgccggcgacgacgaatccgacggcgaacgcgacggtagcggatcagcggaa
gaggccgacgaaagcgccggttccggcggcgaaaacgcgacgctcgatgagctctctact
gcggacgagtcggacgacgcaactgggggcggtgaaaacgggggcgacgaaaacacggac
gccgaaaatacggacgacgaaaacacggacgacgaagacgacggacagctgagcttcggc
gattttacctga
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