Halalkaliarchaeum sp. AArc-CO: AArcCO_0498
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Entry
AArcCO_0498 CDS
T09489
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
haaa
Halalkaliarchaeum sp. AArc-CO
Brite
KEGG Orthology (KO) [BR:
haaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haaa03000
]
AArcCO_0498
Transcription factors [BR:
haaa03000
]
Prokaryotic type
Helix-turn-helix
Other families
AArcCO_0498
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TrmB_EBD_N
TrmB-TrmBL1_EBD_C
TrmB
HTH_11
MarR
HTH_29
HTH_IclR
DUF7317
HTH_7
WHD_Rv2258c
PF0610-like_N
TetR_N
HTH_6
Motif
Other DBs
NCBI-ProteinID:
UWG49821
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Position
complement(491257..492321)
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AA seq
354 aa
AA seq
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MDESTLVDLLGRFGFSDKEIDTYLTLLAHGEATASQIADAAGVSKRYVYSVSETLEKRGF
AEVNDHVVPTVIRANPPEQVIESLQRDVDAMLPGLKQRYAEVEPTADQFEVVKSRVTVLK
RIRALIREAETELVLSLPIDHLPDVREELAAAVDRGVLVLLIVAGVDDQTELSETLPELN
GIASVTRTWSEPMPTILAVDSRIGVLAPMEMLVRSNSDRQAIVFTQEQLGPVIVGSFLGN
YWPVAEEVAVADPAPLPREFADFRHAVLQATRHLRAGTDLRASVEGRATEDDEPVAIEGR
VVDVTQGLITPANNEFPVEHALTLETDDGTVVTVGGPGAFVEDVEASAVTLLAA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtccacgctggtcgacctcctcggtcggttcggcttttccgacaaggagatc
gacacgtatctcacgctgctcgcccacggcgaggcgaccgcgagccagatcgccgacgcg
gcgggggtctccaagcggtacgtctacagcgtcagcgagacgctggagaaacgggggttt
gcagaggtcaacgaccacgtcgtgccgacagtgatccgcgcgaacccgcccgagcaggtg
atcgagagcctgcaacgggacgtcgacgcaatgttgccggggctaaaacagcggtacgcc
gaggtcgaaccgacggccgaccagttcgaggtcgtcaaatcgcgggtgaccgtcctcaag
cggatccgggccctcatccgcgaggcggagacggagctcgttttgtcgctgccgatcgac
cacctcccggacgtgcgcgaggaactggccgccgcggtggaccgtggggtgctggtgttg
ctgatcgtcgccggcgtcgacgaccagacggagctgtcggagacgctgccggaactcaac
ggaatcgcaagcgtcacccgtacctggagcgagccgatgccgacgatcctcgcggtcgac
agccggatcggcgtcctggcgccgatggagatgctggtacggtccaactccgatcgccag
gcaatcgtcttcacccaggagcagctggggccggtgatcgtcgggtccttcctgggcaac
tactggcccgtcgccgaggaggtcgcggtcgccgatccggcgccgctcccccgggagttc
gccgacttccgccatgcggtgctccaggcaacccgccacctccgggcggggaccgacctg
cgggcgagcgtcgagggacgcgcgacggaggacgacgaacccgtcgccatcgagggccgc
gtcgtcgacgtcacgcaggggctgataacgcccgcgaacaacgagttcccggtcgaacac
gcgctcacgctggagacggacgacgggacagtggtaaccgtcggcggaccaggcgcgttc
gtcgaggacgtggaagcaagcgccgtgacacttctggctgcctga
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