Halalkaliarchaeum sp. AArc-CO: AArcCO_1555
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Entry
AArcCO_1555 CDS
T09489
Symbol
dinG3
Name
(GenBank) Rad3-related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
haaa
Halalkaliarchaeum sp. AArc-CO
Pathway
haaa03022
Basal transcription factors
haaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AArcCO_1555 (dinG3)
09124 Replication and repair
03420 Nucleotide excision repair
AArcCO_1555 (dinG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haaa03021
]
AArcCO_1555 (dinG3)
03036 Chromosome and associated proteins [BR:
haaa03036
]
AArcCO_1555 (dinG3)
03400 DNA repair and recombination proteins [BR:
haaa03400
]
AArcCO_1555 (dinG3)
Enzymes [BR:
haaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AArcCO_1555 (dinG3)
Transcription machinery [BR:
haaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AArcCO_1555 (dinG3)
Chromosome and associated proteins [BR:
haaa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AArcCO_1555 (dinG3)
DNA repair and recombination proteins [BR:
haaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AArcCO_1555 (dinG3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
AAA_30
AAA_11
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
UWG50859
LinkDB
All DBs
Position
1553427..1555850
Genome browser
AA seq
807 aa
AA seq
DB search
MSDRSQSASDSSSPEWSPYFGFDSPYANQADAIERIISAAEESGFLAMEGPCGTGKTMAA
LTAAGYLIRETDQYENAIVATPVKQQRRQFVEDLRTMNETLEEPLAGVALVGKRDLCPYG
REGSFPEGKSVQDRCETLRETTAELVSEDSRLEVNERYVSTGDGRDSRPSGEDEQWWDPA
KARALVDATQLDPDASSSPLRTAGRSAPYPPTQPATPSELLDSGDGRLYCPFEADWYARD
KGSPVTFDSGDCGVVTSEEFLPDSVGAGVCPHRAMMVLVDNADVVIGNYNHLFDSASRAI
VDPVVDERTLVILDEAHRLEGRVRGLLTDTVGYATIKQARRDLGVLLERVRQTGRGAETI
EEHLAYNDVEIEHVDEAREFYGEVLEWLERRVDEELRDRFDGYAAGFAWESLPDETLEIE
LRNPAEPEPDEFTRWAETSGYDGGAFRRLSAVGAAVENALEASGIDRETVCTAVGALFGQ
WWERDHTEYFREIELERTDFDRRNVERPWQREYNASLVMYNCMPSDRIKGVFEEFGGGVL
MSATLAPLSIFEEVSGLEALERDGDPPRTVSSRTYELPFPETNRASWIVDVEPFTKRNRG
EPRIDNRNATRERYAYVARLIAESHGNVMLCWPNYAEAAWAAGRLEEEIDKQVLLDQSTG
HEKTRELKREFVGGDSSVLVTSTRGTLTEGVDYEGDDLHTCAVFGVPLVNIGSPRVQAVE
RAYSARFGEGNAFEYALTIPAVRQVRQALGRVIRGPEERGVRIVVGNRYVSGAIHSVHDF
FPETERREFVGMKPEFLPSQFRKFWEE
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgatcgttcccagtctgcctccgacagttcgtcccccgagtggtcgccgtacttc
ggcttcgactcgccgtacgccaaccaggctgacgcaatcgaacggatcatctcggccgca
gaagagtcggggttcctggccatggaggggccctgtggaacaggaaaaacgatggcggcg
ctcactgccgcgggatatctgattcgggagaccgaccagtacgagaacgcgatcgttgcg
acacccgtgaaacagcagcgccgacagttcgtcgaggacctccgaacgatgaacgaaact
ctcgaagaacccctcgccggggttgccctcgtcgggaagcgagatctctgtccgtacggc
cgggagggatcgttcccggagggaaaaagcgtccaggaccggtgtgagacgctccgggag
acgaccgcggaactcgtctccgaagacagtcgcctcgaagtgaacgagcgatacgtctcc
actggagacgggcgtgactcgcggccgtcgggcgaggacgagcagtggtgggatccggcg
aaggcgagggcactcgtcgacgccacacagctggaccccgacgccagcagttccccgttg
cggactgccggccgatcggcgccgtacccgccaacgcagccggcaacaccctcggaactg
ctcgactctggggacgggcgcctctactgcccgttcgaagccgactggtatgcccgtgac
aagggctcgccggtgacgttcgactcgggggactgcggtgtcgtcaccagcgaggagttc
ctccccgactcggtcggtgccggcgtctgtccccaccgggcgatgatggtgctcgtagac
aacgccgacgtcgtgatcgggaactacaaccacctgttcgactcggcaagccgggcgatc
gtcgatcccgtggtcgacgagcggaccctggtgatcctcgacgaggctcaccgtctcgag
ggacgcgttcgggggctgctcaccgacacggtcggctacgcgacgatcaaacaggcgcga
cgggacctcggcgtactgctggaacgcgttcgacagaccggccgcggcgccgaaacgatc
gaggagcatctcgcttacaacgacgtcgaaatcgaacacgtcgacgaggccagagagttt
tacggcgaagtcctggagtggctcgaacgacgagtcgacgaggaactccgggatcggttc
gacggctacgcagccggattcgcgtgggaatcgcttcccgacgaaacgctcgaaatcgag
cttcgaaacccggccgaacccgaacccgacgagttcacccgctgggccgaaacgagcggc
tacgacggtggcgccttccgacggctgagcgccgtcggcgccgcagtcgagaacgcgctg
gaggcgtccgggatcgaccgggagaccgtctgtacagctgtcggcgccctgttcggacag
tggtgggagcgggaccacacggagtatttcagggagatcgaactggaacgcaccgacttc
gaccgtcgcaacgtggagagaccctggcagcgggagtacaacgcctcgctagtcatgtac
aactgcatgccctccgaccggatcaagggcgtcttcgaggagttcggcggcggcgtgctg
atgagcgcgacgcttgcgccgctttcgatcttcgaggaggtgtccgggctcgaggcgctc
gaacgcgacggtgacccgccgcggacggtttcctcgcgaacttacgagctaccgtttccc
gagaccaaccgcgcgagctggatcgtcgacgtcgaaccgttcacgaagcgaaaccgtggc
gaacccagaatcgacaaccggaacgcgacccgggagcgatacgcctacgtcgcccgcctg
atcgcagagagccacggcaacgtgatgctctgctggcccaactacgccgaggcggcgtgg
gctgcagggcggctcgaagaggagatcgacaaacaggtgttgctggatcagtctacgggc
cacgagaagacccgggagctgaaacgggagttcgtcggcggcgactcgtcggtgctcgtc
acgagcactcgcgggacgctcacggagggtgtcgactacgagggagacgacctgcacacg
tgtgcagtgttcggggttccgctcgtgaacatcggttccccccgggtgcaggcagtcgag
cgtgcctacagcgcccggttcggcgaggggaacgccttcgagtacgcgctcacgatcccg
gcggtccgccaggttcgccaggcgctgggtcgcgtgatccgcggccccgaggagcgtggc
gtccggatcgtcgtcggcaaccggtacgtatccggggcgatccactccgttcacgacttc
ttcccggaaacagaacgacgggagttcgtcgggatgaaaccggagtttctcccctcgcag
ttccggaagttctgggaagagtaa
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