Halalkaliarchaeum sp. AArc-CO: AArcCO_1569
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Entry
AArcCO_1569 CDS
T09489
Symbol
spt15-3
Name
(GenBank) TATA-box binding protein (TBP), component of TFIID and TFIIIB
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
haaa
Halalkaliarchaeum sp. AArc-CO
Pathway
haaa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AArcCO_1569 (spt15-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haaa03000
]
AArcCO_1569 (spt15-3)
03021 Transcription machinery [BR:
haaa03021
]
AArcCO_1569 (spt15-3)
Transcription factors [BR:
haaa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
AArcCO_1569 (spt15-3)
Transcription machinery [BR:
haaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
AArcCO_1569 (spt15-3)
RNA polymerase III system
TFIIIB
AArcCO_1569 (spt15-3)
RNA polymerase I system
SL1/TIF-1B
AArcCO_1569 (spt15-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
UWG50873
LinkDB
All DBs
Position
complement(1566023..1566583)
Genome browser
AA seq
186 aa
AA seq
DB search
MTNPKDTINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFR
SGKIVCTGAKSTADVHESLNIVFDKLRELEIPVDEEPEITVQNIVTSADLGTSLNLNAIA
IGLGLENIEYEPEQFPGLVYRLEEPEVVALLFGSGKLVITGGKEPADAEAAVDVITERLE
ELGLLG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatcccaaggatacgatcaacattgagaacgtcgtcgcctccacgggcatcggc
caggagctcgacctccagagcgtcgccatggacctcgagggcgccgactacgaccccgaa
cagttccccgggctggtctaccggacacagaatcccaagtcggccgcgctgatcttccgg
tcggggaagatcgtctgtacgggagcgaagtcgactgcggacgtccacgagagcctcaac
atcgtcttcgacaagctccgcgaactggaaatccccgtcgacgaggagcccgaaatcacc
gtccagaacatcgtcacgagcgccgatctggggacgagcctcaacctcaacgcgatcgcg
atcggactcgggctcgagaacatcgagtacgagcccgaacagttcccgggactggtctat
cgcctcgaggagcccgaagtcgttgcgctgcttttcggctccggcaaactcgtgataacc
ggcggcaaggagcctgccgacgccgaggccgcggtcgacgtcattaccgaacgactcgag
gaactcggcctgctcggctga
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