Halalkaliarchaeum sp. AArc-CO: AArcCO_2378
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Entry
AArcCO_2378 CDS
T09489
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
haaa
Halalkaliarchaeum sp. AArc-CO
Pathway
haaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AArcCO_2378 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haaa03021
]
AArcCO_2378 (rpoB)
Enzymes [BR:
haaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AArcCO_2378 (rpoB)
Transcription machinery [BR:
haaa03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
AArcCO_2378 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
UWG51669
LinkDB
All DBs
Position
complement(2373534..2375360)
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AA seq
608 aa
AA seq
DB search
MAQARDAKVFVNGSLVGTHPDPEQLAERIREARRRGDISRMVNVSVNPRTKEVIVNADAG
RARRPLIVVEDGEPLLEEEHVEALERGDIDFEDLVERGYVEFIDAEEEEDIYVAVDEDEL
TPKHTHLEVDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPAANYRIRPDTRQH
LLHYPQLAMVNTQTSDQIGFDKRPAAQNFVVAVMSYEGFNIEDALVMNKGSVDRALARSH
FFRTYEGEERRYPGGQEDRFEIPSQDVRGARGEDAYTHLDEDGLVNPETPVDENSVLLGK
TSPPRFLEEPDDMGGLSPQKRRETSVTMRSGEDGVVDTVTLMEGEDGSKLSKVSVRDERI
PELGDKFASRHGQKGVVGHLAPQEDMPFTEEGVVPDLVLNPHALPSRMTVGHVLEMLGGK
VGSLEGRRVDGTPFQGEDEEELREALEEHGFDSSGKEVMYSGVTGEKIEAEIFVGTIFYH
KLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRVGEMEREVLIGHGAAMALKERLLD
SSDREDVYVSADTGMVAVEDVEQRRVYDPITGNDDNIHEIEVSYAFKLLLDEMKALGIRP
KLELEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcacgcgacgcgaaagttttcgtcaacggcagtctggtcggaacacatccc
gaccccgaacagctcgcagaacgaatcagggaggcgcgccgccgcggcgacatctcccgg
atggtgaacgtctcggtcaatccccgaaccaaggaggtcatcgtcaacgccgacgccggt
cgggcgagacggccactcatcgtcgtcgaggacggcgaacccctcctcgaggaggaacac
gtcgaggcgctcgaacgcggcgacatcgacttcgaggacctcgtcgaacgcggctacgtc
gagttcatcgacgccgaggaggaggaggacatctacgtcgccgtcgacgaggacgagcta
acgccgaaacacactcacctcgaggtcgacccgcagctcatcttcgggatcggcgccgga
atgatcccctacccagagcacaacgcatcgccccgtattacgatgggggcagggatgatg
aaacagtcgctgggcctgccggcggcgaactaccggatccgtccggacacccgccagcac
ctcctgcattacccgcagctcgcgatggtgaacacccagacgagcgatcagatcggcttc
gacaagcggcccgcagcccagaacttcgttgtggccgtgatgtcctacgaggggttcaac
atcgaggacgcgctggtgatgaacaagggatctgtcgaccgcgcgctcgcccggtcgcac
ttcttccggacctacgagggcgaggaacgccgctaccccggcgggcaggaggaccgcttc
gagatccccagtcaggacgtccgtggcgcacgcggagaggacgcatacacccatctcgac
gaggacggcctcgtcaaccccgagacgccggtcgacgagaactcggtgttgctcgggaag
acgtcgccgccgcggttcctcgaggagcccgacgacatgggcgggctctccccgcagaaa
cggcgcgaaaccagtgtgaccatgcgatcgggcgaggacggcgtggtcgacaccgtcacc
ctgatggagggcgaggacggctcgaaactctcgaaggtgtcggtacgcgacgagcggatc
cccgaactcggggacaagttcgcctcgcgacacggacagaagggagtcgtgggtcacctc
gccccacaggaggacatgccgttcaccgaggagggcgtggtgccggacctcgttttgaac
ccccacgcgcttccgtctcggatgacggtcggccacgtgctggagatgctcgggggcaag
gtcggatccctcgagggccgccgcgtcgacgggacgccgttccagggcgaggacgaagag
gaactccgcgaggcgctcgaggagcacggcttcgactccagcggaaaggaggtcatgtac
tccggagtcaccggagagaagatcgaggcggagatctttgtcgggaccatcttctatcac
aagctgtaccacatggtctcgaacaagctgcacgcccgttcccgcgggccggtgcaggtg
ctcacccgccagccgacggaggggcgcgcccgggagggtggcctgcgcgtcggcgagatg
gaacgtgaggtgctcatcgggcacggcgccgcgatggcgctgaaggaacggctgctcgac
tcctctgacagagaggacgtgtacgtctccgcggacacggggatggtcgccgtcgaggac
gtcgagcaacgccgcgtgtacgatccgatcaccggcaacgacgacaacatccacgagatc
gaggtgagctacgcgttcaagctcctgctcgacgagatgaaggcgctcggcatccggccg
aagctcgaactggaggacgcagtctaa
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