Halocatena salina: MW046_00420
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Entry
MW046_00420 CDS
T08090
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haad
Halocatena salina
Pathway
haad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MW046_00420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haad03021
]
MW046_00420
Transcription machinery [BR:
haad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MW046_00420
Prokaryotic type
Archaeal type
TFB
MW046_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Sigma70_r4
Cyclin_C
Cas12f1-like_TNB
Cyclin_N
Auto_anti-p27
DZR
DUF7129
A2L_zn_ribbon
HTH_Tnp_ISL3
FtrD-like
BRF2-like_C_cyclin_rpt
Zn_ribbon_RPB9
Zn_ribbon_RRN7
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
UPM42935
UniProt:
A0A8U0A1B4
LinkDB
All DBs
Position
complement(86776..87756)
Genome browser
AA seq
326 aa
AA seq
DB search
MSDTTIREYTEESRESTTEREDEEEQESVSTCPECGGRLINDSEHGETICEECGLVVEED
SIDHGPEWRAFDAQEKDEKSRVGAPTTTMMHDKGLSTNIGWQNKDAYGNSLSSRQRQKMQ
RLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPETVRETASVIYRRALSDNLLPGRS
IEGVATAALYAAARQAGTPRSLDEITLVSRVDKMELTRTYRYVVRQLNLEIKPADPESYV
PRFASDLDLTEEVTRRSRDLISNAREAGILSGKSPVGLAAAAIYAASLLCNQKVTQSEVS
EVANISEVTIRNRYKEILEADASPTV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatacgacaatccgagaatacacggaagagtcgagagaatcgaccaccgaacga
gaggacgaagaagaacaagagtcagtctcgacgtgtccggagtgtggcggtcgactgata
aacgacagcgaacacggagagaccatttgtgaggagtgcggtctggtcgtcgaggaggac
tcgatagaccacggtccggagtggcgggcattcgacgcccaagagaaagacgagaaaagt
cgtgtcggtgcgccgaccaccacgatgatgcacgacaagggattgtcgacgaatatcggg
tggcagaacaaagacgcgtacggcaactcgctgtcttcacgccagcgccagaagatgcag
cggttgcgcacctggaacgagcgctttcgcactcgcgactccaaggagcgcaacctgaaa
caggcgcttggtgagatcgatcggatggcatcggcgctcggcctgcccgagaccgtccgt
gagactgcgagcgttatctaccgacgcgcgctgtcagacaacctcctaccgggacgatcg
atcgaaggcgtcgctaccgcggcgctgtacgccgctgctcgtcaagccggtacgccgcgg
agcctcgatgagatcacgctggtgtcccgggtcgataagatggagttgacacggacctac
cggtacgtcgtgcgccagctcaacctcgaaatcaagcctgctgatcccgagagctacgtc
cctcgattcgccagcgatctcgatctcacggaggaggtcacgcgtcgttcccgggacctc
atcagcaacgctcgtgaggcgggcatcctgagcgggaaaagcccggtcggactggccgca
gcagcgatctacgccgcgtccctgctgtgtaaccagaaggtcacgcagagcgaagtgtcg
gaagttgcaaacatatcggaagtgactatcagaaatcggtataaggagatcctcgaggca
gatgccagcccgacggtctaa
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integrated database retrieval system
